Varibaculum cambriense: CYK25_004945
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Entry
CYK25_004945 CDS
T09090
Symbol
clpX
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpX
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
vcb
Varibaculum cambriense
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
vcb03110
]
CYK25_004945 (clpX)
Chaperones and folding catalysts [BR:
vcb03110
]
Heat shock proteins
HSP100
CYK25_004945 (clpX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
zf-C4_ClpX
AAA
MCM
AAA_5
Mg_chelatase
ClpB_D2-small
RuvB_N
AAA_22
Sigma54_activat
IstB_IS21
AAA_14
AAA_18
NACHT
AAA_3
TsaE
ABC_tran
AAA_16
nSTAND3
Sigma54_activ_2
SKI
Viral_helicase1
ORC-CDC6-like
TIP49
PduV-EutP
AAA_28
AAA_7
DUF87
AAA_19
NPHP3_N
RsgA_GTPase
RNA_helicase
Fer4_18
AAA_24
Motif
Other DBs
NCBI-ProteinID:
WIK89503
LinkDB
All DBs
Position
complement(1070650..1071891)
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AA seq
413 aa
AA seq
DB search
MDEEAELLKCSFCGKTQRQVRKLIAGSAVYICNECVDLCNEIMEEDTAKHSGSKAKPLPK
PKEIYDFLNHYVIGQDQAKRALSVAVYNHYKRVQAKERGQNIDMSLTKSNILLLGSTGCG
KTHLARSLAKLLNVPFAIVDATALTEAGYVGEDVENILLKLINAADGDIKRAERGIIYID
EIDKISRKAENASITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPHQEYLEIDTNSIL
FIAAGAFAGIDEIVKSRLGQHSTGFGSSLKSSAEHGDLYAQVTADDLHRFGLIPEFIGRL
PVLTSVKELTESDLVRVLVEPENSLVTQYCSLFELDGIDLHFTDGAIHAMARMARERGTG
ARALSSIMEAVLKETMFEVPSQPDVRSVTITEEVVNQGAKPTLLETVPRSKTA
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
gtggatgaagaggccgagctactcaagtgctcgttttgcggcaagacgcagcgacaagta
cgcaagttaattgccggttcggcagtctatatctgtaatgaatgcgttgacctgtgcaac
gaaatcatggaagaggacaccgcgaagcattccgggtccaaagctaagcctctgccgaag
cctaaagaaatctacgacttcctaaatcactatgttattgggcaggatcaggctaaacgg
gcgctttcggtcgcggtctacaaccattacaagcgggtgcaggctaaagagcgaggacaa
aacattgacatgtctttgacgaagtcgaatattttgctgctcggttccaccggttgcggc
aaaactcatttggcgcgctccctggctaagctgcttaacgtcccgtttgccatcgtggat
gccaccgccttaaccgaagccggatacgtgggcgaagacgttgagaatatcttgctgaag
ttaattaatgccgccgatggcgatattaaacgcgctgaacgcgggattatttatatcgac
gagattgataagatttcccgcaaagcagagaacgcctcgattacccgggatgtttcgggg
gaaggcgtgcagcaggcgttactaaaaattatcgagggaaccgtggcctcggtacctccg
caaggtggacgtaaacacccgcaccaggagtatctagagattgacactaactcgatcctc
tttatagcggctggagcatttgccggtatagatgagattgtgaagtcacggctagggcaa
cattccaccggttttggttcttccttgaagtcttctgccgaacatggtgacctttatgca
caggtcaccgcggatgatttgcatcggtttggcctcattccggagtttatcgggcggctg
ccggtattaacttcggtaaaggaactcaccgagtccgatctggtgcgggtattggtggag
ccagaaaactccttggttacccagtactgttccctgtttgagttagacggaattgatctg
catttcaccgatggagccattcacgcgatggcgcggatggccagggaacgcggcactgga
gctagggcgctttcgtccattatggaggcggtgctcaaggagactatgttcgaggttcct
tcccaaccggatgtacgttccgtgactatcacggaagaggtagtgaaccagggggctaaa
cccactttgctagagactgttccgcgttctaagacggcctaa
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