Varibaculum cambriense: CYK25_005255
Help
Entry
CYK25_005255 CDS
T09090
Symbol
rsgA
Name
(GenBank) ribosome small subunit-dependent GTPase A
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
vcb
Varibaculum cambriense
Pathway
vcb00730
Thiamine metabolism
vcb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CYK25_005255 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcb03009
]
CYK25_005255 (rsgA)
Enzymes [BR:
vcb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
CYK25_005255 (rsgA)
Ribosome biogenesis [BR:
vcb03009
]
Prokaryotic type
GTPases
CYK25_005255 (rsgA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
AAA_16
ABC_tran
FeoB_N
nSTAND1
AIG1
AAA_22
MobB
AAA_30
RNA_helicase
AAA_29
Roc
ATP-synt_ab
ATPase_2
NACHT
AAA_7
AAA_25
Glyco_trans_4_3
nSTAND3
Guanylate_kin
Ras
Motif
Other DBs
NCBI-ProteinID:
WIK89552
LinkDB
All DBs
Position
1135123..1136124
Genome browser
AA seq
333 aa
AA seq
DB search
MSRRDIGTDDPRVRVRPARSKPRRSKKQVDYSTSPTAFVFAVDRGRIHVQMGDTKLVGVK
ARALGRHGIVVGDQVRVTGDLSGKSGSLARIVEVLPRKTELTRSAEDSPGAKEKPMVANA
NQMAIVTACADPLPRPGMIDRLLVAAYCAGIKPLLLVTKSDLTSPEPLLELFRPLQVPSV
VTSIESGEGIDEVAEMLAGRVSVLVGHSGVGKSSLMNELIPQAERSTGQVNQVTGRGRHT
STSVMALPFQDGWLIDTPGIRSFGLAHISEDDLLAAFPDLAEIATDCPKLCRHLASSPGC
QLSTLEETDPAQERRVESFRRLLSSQHSQNLLV
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcgtgatattggcaccgacgatcccagggttagagttcgtcctgctcgttcc
aaaccacgtcgctcaaaaaagcaggtagattattccaccagtcccactgcttttgtgttc
gcggtagatcgcggtcggatccacgtacaaatgggagacaccaagctagtgggggtaaaa
gcccgggcactaggcaggcacggtatcgtagtcggggatcaggtacgggtcaccggggat
ttaagtgggaaaagtggttctctggcgcggattgtggaagttttaccacgcaaaacagaa
ctaacccgctccgcagaagatagccccggggcaaaagaaaaacccatggtggcaaacgct
aatcaaatggcaattgttaccgcctgcgctgatcccctgccccgtccgggcatgatcgat
cggctattagttgccgcttattgcgccggaatcaagccgttactactggttactaaatcc
gatctgacctcaccagagccgctgctggaacttttccgacccttgcaggttcctagcgtg
gtaaccagtatagagagcggagaaggaatcgatgaggtagccgagatgctggctgggcgg
gtcagtgtactggtaggccactcgggtgtaggtaaatcctcgctgatgaatgagcttatc
ccgcaggctgaacgctccaccggacaagttaaccaggtgaccgggcgcggtcgccacacc
tccacttcggtaatggctctccccttccaggatggctggttgattgatacgccggggatt
cgttcttttggtttagcgcatattagcgaggacgatctgttagccgccttcccggatcta
gcggagatagccaccgactgcccgaaactatgccgccacctagcatcctcaccgggatgc
cagctaagtaccttagaagaaaccgatcccgcccaagagcggcgggtggaatctttccgg
cgcttactttcctcccaacatagccaaaatttgttggtgtaa
DBGET
integrated database retrieval system
