Varibaculum cambriense: CYK25_005290
Help
Entry
CYK25_005290 CDS
T09090
Name
(GenBank) citrate synthase
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
vcb
Varibaculum cambriense
Pathway
vcb00020
Citrate cycle (TCA cycle)
vcb00630
Glyoxylate and dicarboxylate metabolism
vcb01100
Metabolic pathways
vcb01110
Biosynthesis of secondary metabolites
vcb01120
Microbial metabolism in diverse environments
vcb01200
Carbon metabolism
vcb01210
2-Oxocarboxylic acid metabolism
vcb01230
Biosynthesis of amino acids
Module
vcb_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CYK25_005290
00630 Glyoxylate and dicarboxylate metabolism
CYK25_005290
Enzymes [BR:
vcb01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
CYK25_005290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
Dynein_heavy
DUF5743
Motif
Other DBs
NCBI-ProteinID:
WIK89559
LinkDB
All DBs
Position
complement(1143573..1144913)
Genome browser
AA seq
446 aa
AA seq
DB search
MAENQNNTPESNDFGRLPGVLEVDGKTIEFPPVQATCGDQGIDVSKLRNQTGLVALDPGF
STSASCTSKVTFIDGGKGILRYRGYPIDQLAHHSSFLEVAYLLIRGELPTPSQLDEFVRR
VKRQRLLHEDFRAFFTAFPSDGHPMAILQGGIAGMATYYEETFADVHDPELQDIQAVQLL
AKVPTMISYIAKRAAGLPLLYPDNERSYVEDFIRLTFGLPYQSYDIDPAIIRALEVLFIL
HADHEQNCSTSTVRLVGSSNANMYASVAAGVGALSGPLHGGANEAVLRMLINIRDNDLSI
PEFVEKVKNKEKGVKLMGFGHRVYKNYDPRAAIVREQAHNVLDRMGKNNDLFDLAMELEE
VALSDDYFIERKLYPNVDFYTGLIYSAMGFPTKMFTPLFALGRLPGWISQYIEMLHDPMT
RIGRPRQVYQGEPQRDYVPLRMREAK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaatcaaaataacaccccagaatccaatgacttcggccggctaccgggtgtg
ttggaagtcgacggtaaaaccatcgagttcccacccgtgcaagcaacctgtggtgatcaa
ggcattgatgtttccaagctgcgtaatcaaaccggattagtagcccttgatccgggcttt
tctacctctgcctcctgcacctcaaaagttacctttattgacggcgggaaggggattttg
cgttaccggggctatccgatagaccagttggcgcatcactccagtttcttagaagttgcc
tatttactaatccggggagagctgcccacgccttcgcaactagatgagttcgtgcgccgg
gtaaaacgtcagcgcctgctacatgaagattttcgggcgttctttaccgccttcccctcc
gatgggcacccgatggcgattttgcagggtggtatcgccgggatggctacctattatgag
gaaactttcgcggatgtgcatgatccggagttacaagatattcaagccgtgcaattgctg
gcgaaagtgccgaccatgatttcctatatcgctaagcgggctgcgggtctaccgttgctc
tatcccgataatgagcgttcctatgtagaggactttattcgtttgacctttggtttaccc
taccagtcctacgatattgatcccgcaattatccgggctctggaagtgctctttattttg
catgccgatcacgaacaaaactgttctacttccacggtgcggttggtcggttcctccaat
gccaatatgtatgcctcggttgccgccggggtgggagcactgtctggaccgctgcatggt
ggcgcgaacgaggcggtgttacggatgctgatcaatatccgtgacaacgatctttctatc
ccagaattcgtggaaaaagttaagaacaaggaaaagggggtaaagctgatggggtttggc
caccgcgtctataaaaattatgatccgcgggcggcaatcgtgagggaacaggcacataac
gttctggatcggatgggtaaaaacaatgacctctttgatctagctatggagctggaagaa
gtcgccctctcagatgattacttcattgaacgcaaactctatccgaacgttgacttctat
accggtctaatctattccgcaatgggcttccccaccaagatgtttaccccgctatttgcg
ctggggaggctaccaggttggatttcgcaatatattgaaatgctgcatgaccccatgacc
cgtatcggacgtccgcgccaggtataccagggggagccgcaacgtgactatgtgcccttg
cggatgcgggaagcaaaatag
DBGET
integrated database retrieval system