KEGG   Varibaculum cambriense: CYK25_005410
Entry
CYK25_005410      CDS       T09090                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
vcb  Varibaculum cambriense
Pathway
vcb00061  Fatty acid biosynthesis
vcb00071  Fatty acid degradation
vcb01100  Metabolic pathways
vcb01212  Fatty acid metabolism
vcb02024  Quorum sensing
vcb04146  Peroxisome
Module
vcb_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:vcb00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    CYK25_005410
   00071 Fatty acid degradation
    CYK25_005410
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    CYK25_005410
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CYK25_005410
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:vcb01004]
    CYK25_005410
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vcb04147]
    CYK25_005410
Enzymes [BR:vcb01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     CYK25_005410
Lipid biosynthesis proteins [BR:vcb01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   CYK25_005410
Exosome [BR:vcb04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   CYK25_005410
  Exosomal proteins of breast cancer cells
   CYK25_005410
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: WIK87682
LinkDB
Position
complement(1167510..1168634)
AA seq 374 aa
MAAHREQPFSPGELAGEIAPVAEGELAAIIYTSGTSGRPLGVEHSRETMYWAWANYRDAF
DYRNSDTGLALAPLSHIGGFNGTTNDIFCHGGKVVVIAGFSPLTAARIIRDEQVTIGFAV
PTMFTGMLDAIEKENGKPLKENPFPHWRRPLIGGAPLPAALARRMEKLELRPIQVWGMTE
TGGAGCYLGINESLQHPEAAGRPFTYSQVTVRDQEGKALPAGAQGQITIGGPHVCKTNYP
GIAMSAIDGQIETGDIGYIGEDGLLRLSGRASDVIISGGEHVFPAQVEDALSTFPGIGQV
AVIGLEDEYWGQRVCAIITGTATSEDVKQFLKGKLAAYKIPKQIIQVENLPLNSAGKLSR
QTLRESLSNGGRGK
NT seq 1125 nt   +upstreamnt  +downstreamnt
atggctgcccatcgggagcaaccgttttctcccggggaactagccggcgagattgccccg
gtagccgagggagagctggcggcaatcatctatacttccgggacttctgggcgtcccctg
ggggtggaacactctcgggaaaccatgtattgggcgtgggcgaactatcgggacgctttt
gactaccgcaactcggataccggtttggcgctggcgcccttgtcccatatcggcgggttt
aacggcaccactaacgatattttttgtcacggcggcaaagtggtagtgattgccggattt
tctccgcttaccgccgcccggattattcgcgacgagcaagtcactatcgggttcgcggtt
cccactatgttcaccgggatgctagatgctatcgaaaaagaaaacggcaagccgctgaaa
gaaaatcccttcccgcattggcgccgtcctctgattggaggcgcgcccctaccggcagct
ttagcgcggcggatggaaaaacttgagctgcgtccgatccaagtgtgggggatgaccgaa
accggaggggctggttgttacctggggataaacgaatctttgcagcaccccgaggccgcc
gggcgtcccttcacctattcccaagtgacggtacgcgaccaggaagggaaagcactgcct
gcaggcgctcagggacaaatcaccatcggtggcccgcacgtatgcaaaaccaactatcca
ggcatagccatgagtgctattgacgggcagatcgaaaccggagatattggttatatcggt
gaagacggtttgctgcgcctgagcgggcgggcaagtgacgtaattattagcggcggggaa
cacgttttccccgcgcaggtcgaggacgcgctctcaactttccccggtatcgggcaggtt
gcagtaatcggcctggaggacgagtattggggacagcgagtctgtgcaataatcaccgga
accgccaccagtgaggacgtgaaacagttcctaaaaggcaaactagccgcctataaaatc
cccaagcaaataatccaagtagaaaacctacccctaaacagcgccggaaaactatcccgc
caaaccctcagagaatctttaagtaacggaggtcgcgggaagtaa

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