KEGG   Varibaculum cambriense: CYK25_005770
Entry
CYK25_005770      CDS       T09090                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
vcb  Varibaculum cambriense
Brite
KEGG Orthology (KO) [BR:vcb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vcb02048]
    CYK25_005770
Enzymes [BR:vcb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     CYK25_005770
Prokaryotic defense system [BR:vcb02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   CYK25_005770
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like ResIII HSDR_N DEAD AAA_22 AAA_30 CDC13_N
Other DBs
NCBI-ProteinID: WIK87748
LinkDB
Position
complement(1238604..1241618)
AA seq 1004 aa
MMAVGNPIDEKAFQRLIIDELVATHEYIERPRRVFDPVWAIDEELLFAFLERTQGDKLEL
LRAAYNGGADATIRNKIMHKIGSDGLIRSIWNGVDFDGGIQLDLVYPRPSAGFDARSREL
FDANQLSIMEEVYHKDGERIDLVIFLNGLALFTVELKCNTSASGDYRNAIAQYQTERDST
TRLLSPKIGALAHFAMDTNEVYVCAELKGRESFFLPFNQGQPAGEDPHNVTGGNPHNPQG
VNTSYMWEQIWTKATIFDLLYDFIYIETKRDKHGRKVGEHPIFPRYQQLRAVRAVSSDML
RSPLLLNYLIEHSAGSGKTKTISWLAHKLASLYKPGTDELLYDKVIIATDRKVVDKQLQD
AVTDMAKDSGIIRVMDKNKTSSDLAKALGLDPTRRKSSYRIIATTLQKFLYLSAGELAGS
GKRFVVIIDEAHGSTSGKNMASVNAALASGDAPDSSLDELAQFISQGMRSSARQSNISMV
GFTATPTGRTLQQFGKLDEQGHYEAFDLYCMRQAIDEGFILDVTANYTTYDAFCKIVKAV
GDDPELESKAAKRKLTHMISTSEENITNKLQVMIEHFTSVVAPTLHDKAKAMIVTAGREQ
AARYFLAYQKMRAADMPRLDKHQALVAFTGEVDVDGKTWSEAGLNGFSDDLTAEEFDTDN
YRLLIVADKYQTGFDQPKLCAMYVDKTLRGVTAVQTLSRLNRIVYDKRTFILDFTNDFED
IQSAFAPYYETTTLTDPLTISDVRETYRRLMELQILDIDDVEEYNELLAKEQLTHRDKQR
MWSLIDAAARIVGDMEEEEADEARRVIRNFIKQYTFLLQVMPFEDKAMHMDYNFCTSLMR
AIDAGHGGGLDFDLTDKVTIEDFRVEKSDEHEGKQLVAEPEVKIAKGTGSGLTETQLEKL
SKIIQDWNARYGTTFDTDIAAGSLVALQATLAKDPKVQQSARVNSKNSFRHTVEEQTQGA
LIAGYSQNTEWHKFLLNQEEARKELVQAFSDDIFDALKEKIREK
NT seq 3015 nt   +upstreamnt  +downstreamnt
atgatggctgtaggtaatccaattgatgaaaaagcgttccagcggctcattattgacgag
ctggtagcgactcacgaatacatcgagcgtccgcgtcgcgtgtttgatccggtgtgggcg
attgatgaggagcttttgtttgcgtttctggagcgcacgcagggtgacaagcttgagttg
ttacgtgccgcatataacggtggggccgatgccaccattcgtaacaagatcatgcacaag
attggctccgatgggctaatacgttcgatctggaacggcgtggacttcgatggtggcatc
cagcttgacctggtgtatccgcgcccgtcagccgggttcgacgcgaggtcgcgagagctg
ttcgacgcgaaccagctgtcgatcatggaagaggtctaccacaaggacggtgagcgcatt
gaccttgtgatcttcctcaacggcctcgcgttgttcaccgtcgaactcaagtgcaacacc
tcagcctcgggtgactatcggaacgctatcgcgcagtaccaaaccgagcgggactctacg
actcggctgttatctcctaagattggggcgctcgcacatttcgcgatggacaccaacgag
gtctacgtgtgcgctgagctgaagggacgcgaatcgttcttcttgccgttcaaccagggt
cagcccgctggcgaagacccgcataacgtgaccggcggcaaccctcacaatccgcagggc
gtcaacacgtcctacatgtgggagcagatctggacgaaagcaaccatcttcgatctgctg
tacgacttcatctacatcgagacgaagcgggataagcacggtcgcaaggttggtgaacat
ccgatcttcccacgctaccagcagctgcgcgcagtgcgtgcagtctctagcgacatgctg
cgtagccctctgctgttgaactacttgatcgaacactctgctggttctggcaagacgaag
acaatctcgtggctagctcacaagctcgcaagcctgtacaaaccgggcactgacgagttg
ctctacgacaaggtcattatcgccaccgaccgtaaagtcgttgacaagcagctccaggat
gcggttacggacatggcgaaagattccggcatcattcgggtaatggataagaacaagacc
tcctctgatcttgccaaagcactcggtctcgatccaacgagacgtaagagcagctaccgg
atcattgccaccacgctccagaaattcctttacttgtctgctggagagctcgccggttcg
ggtaaacgctttgtggtgattatcgacgaagcgcacggatcgacgagcggcaagaatatg
gcctccgtcaatgccgcactggcaagcggagatgccccggattcgtctcttgatgagctc
gcccagttcatatcccaggggatgcgttcatcggcgcgccagtccaacatttccatggtt
ggattcaccgcgacccccaccgggcgaacgttgcagcagttcggcaagctcgatgagcaa
ggccactatgaagcgttcgacctgtattgcatgcgccaagctatcgacgagggcttcatc
ctagatgtcactgcgaactacaccacctatgacgcgttctgcaagatcgttaaggcagtc
ggcgacgatcccgaattggaaagcaaagcggccaaacgcaaactcactcacatgatctcc
acttcggaggaaaacatcaccaacaagctgcaggtgatgatcgaacacttcacttcggtg
gttgctcccacgcttcacgacaaagcgaaggcgatgattgtgaccgccggtcgagagcag
gcggcgaggtacttccttgcctaccagaagatgagagccgctgacatgccccgtctcgac
aagcaccaagcgctggtggctttcaccggcgaagtggacgtcgacgggaaaacgtggagc
gaggcagggctaaacggcttcagcgacgatctcaccgccgaagaattcgacaccgataac
taccggctgcttatcgttgcggacaagtatcagaccggatttgatcaacccaagctgtgt
gcgatgtacgtcgacaagacactgcggggtgtcacagcggttcaaacgctctctcgactc
aatcgcatcgtttacgataagcgcactttcatcctggacttcaccaacgacttcgaggac
attcaaagcgcgttcgctccctactatgagacgacgacgctcactgatccgttgacgatc
agcgacgtgcgggaaacttatcgacggctgatggaactgcagattttagacatcgatgat
gtcgaggaatacaacgagctcctcgccaaagagcagctcacgcaccgcgacaagcagcgg
atgtggtcgttgatcgacgcggcggctcgcatagtgggggacatggaagaggaggaagct
gacgaggcacggcgcgtaattcgcaacttcatcaagcaatacacgttcttgctgcaggtc
atgcccttcgaggacaaggccatgcatatggactacaacttttgcaccagcctcatgcga
gccatcgatgcaggccatggaggcggccttgacttcgacctcacagacaaggtcacaatc
gaggacttcagggtagaaaagagcgatgaacacgagggtaagcagctggtcgctgaacct
gaagtcaaaatcgccaagggtaccggcagtggcctaaccgaaacccagctagaaaagctc
tctaagatcatccaggattggaacgcccgctacggcacaaccttcgataccgacatcgca
gcagggtcactcgttgctctccaagcaaccttagcgaaagacccgaaggtacagcagagc
gcgagagtcaacagtaagaacagcttccggcacactgttgaggagcaaacccaaggtgcc
ctcatcgctggatactcccagaacaccgagtggcacaagttcctgctcaaccaggaagaa
gcccgaaaggagctcgtccaggctttctccgacgacatcttcgacgctttgaaggagaaa
atccgagagaagtag

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