Varibaculum cambriense: CYK25_005880
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Entry
CYK25_005880 CDS
T09090
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
vcb
Varibaculum cambriense
Pathway
vcb00500
Starch and sucrose metabolism
vcb01100
Metabolic pathways
vcb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
CYK25_005880 (glgX)
Enzymes [BR:
vcb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
CYK25_005880 (glgX)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
WIK87769
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Position
1258585..1260729
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AA seq
714 aa
AA seq
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MEIWPGKPYPLGATYDGAGVNFAVFSEVATKVYLCLIAEDGSEERIEMREVDHHVWHCYI
PGLRDEQRYGFRVEGPYDPEQGHRCDINKFLLDPYAKATDGTVGAKQSLYSYDWNDPSQA
NHDDSLPDMAVSVVTTPYFDWGNDRPPGHDLHKLVIYEAHVKGFTKLNEQIPEKERGTYA
GIANPVTIEYLKNLGVNALELMPVHQFVNDSTLQERGLSNYWGYNTIGFFAPHAQYRSQD
AVDGQVQEFKQMVKNLHQAGIEVILDVVYNHTAEGNHMGPTLSFKGLDNASYYRLVEDDK
EHYFDTTGTGNSLLMRSPAVLQLIMDSLRYWAIEMHVDGFRFDLASTLARELHDVDKLSA
FFDIIHQDPVLSQLKLIAEPWDVGDGGYQVGGFPSMWSEWNGKYRDTVRDFWRGNYATLP
EFASRFCGSADLYEQSGRRPNASINFVTAHDGFTMHDLVSYNEKHNEANGEGGGDGESHN
RSWNCGVEGPTDDPQIHKLRARQHRNFLTTLFLSQGVPMLLMGDEVARTQKGNNNTYCQD
NELSWMDWSFEDAEEDDYRLKLLEFTKHLIKFRNDHPVFHRRRFFAGAPSRGGQSDLGEI
NWFAPNGQKMTEEAWNNEEARSLMIFLNGEAIREPDARGKRIIDDSFLLLFNADPEPCTF
QIPEGHGSGWKIAISTMEDVPGKDAEEEIEYGTNDCLELLDRSVVVLIREIAEE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggaaatttggccagggaaaccgtatccactcggtgcaacctatgacggagctggggta
aactttgcggtatttagcgaggtagcaaccaaagtttatctttgtttaatcgcagaggat
ggcagcgaagaacgcatagaaatgcgcgaagtagaccaccacgtgtggcattgctatatt
ccgggactgcgtgatgagcagcgttatggttttcgagtagaaggcccctacgatccagaa
caaggacaccgctgcgatatcaataagttcctcctcgacccttacgcaaaagccaccgat
ggcaccgtgggagctaaacagtcgctatattcctatgactggaacgatcccagccaagct
aaccatgacgactcccttcctgatatggcggtttcggtggtaactacgccctattttgat
tggggaaatgaccgcccacccggacacgacctacataaactcgtcatttacgaggcgcac
gtaaaaggcttcaccaagcttaatgaacagattccggaaaaagaacgcggcacctatgcg
gggatcgccaacccggtgactatcgaatatctgaaaaatttaggggtaaacgccctcgaa
ctgatgcccgtacaccagttcgttaatgactccaccttgcaagaacgtggcctatcaaac
tattggggatataacaccatcgggttttttgctccccacgcccagtaccgctctcaagac
gcagttgatgggcaagtccaagagttcaagcaaatggtgaaaaacctccaccaggcgggg
atcgaagtaatcctggacgtggtctataaccacaccgccgaaggcaaccatatggggccc
accttgtctttcaaggggctagataacgcctcctactatcgcctggtagaggacgataaa
gaacactatttcgacaccaccggaaccggaaactcgctactgatgcgttcgccagcagtg
ctgcaactgattatggattccctgcgctactgggcaatcgagatgcacgtagatggtttc
cgtttcgacctggcctctaccctggcgcgcgaactgcacgatgtggacaaactctcggca
tttttcgatattatccatcaagatccggtgctttcccagctaaaactaatcgccgaacct
tgggacgtaggagatggcggctaccaggtaggcggcttcccctctatgtggagcgaatgg
aacggaaaataccgcgacacggttcgcgacttttggcgcggcaactacgccacgctaccc
gagttcgcctcccgcttctgtggcagcgccgatttatatgaacaaagtggacgccgcccg
aatgcgtctatcaactttgtaaccgcccacgacggcttcactatgcacgacctggtttcc
tataacgagaaacataacgaggctaacggcgagggcggaggcgacggggaatcccataac
cgttcctggaactgcggagtggaaggccccaccgatgacccgcaaatacataaactgcgg
gcacgtcaacaccggaacttcctaactaccctattcctctcccaaggggtaccgatgctg
ctcatgggagacgaagtagcccgcacccaaaaaggaaacaacaacacctactgtcaagat
aatgaactctcttggatggattggtccttcgaggacgcggaagaagatgactaccgactc
aaactcctagagttcaccaaacacctgattaagttccgaaatgatcatccggtattccat
cgccgccgtttctttgccggggctccctcacgtggcgggcaatccgatctcggcgagatc
aactggtttgctcccaatgggcaaaagatgaccgaagaagcctggaacaatgaagaagcg
cgctccctgatgattttcttaaatggtgaggccattcgggagcccgacgcgcgcggtaaa
cggattattgacgattctttcttattgcttttcaatgccgacccggagccctgcactttc
cagataccggaagggcacggttccggctggaaaatcgcgatctccactatggaagacgtt
cccggtaaagatgccgaagaagaaatcgaatacggaactaatgactgcctcgagctgcta
gaccgctcagtagtggtattgatccgcgaaatagcggaggaataa
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