Varibaculum cambriense: CYK25_006085
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Entry
CYK25_006085 CDS
T09090
Name
(GenBank) ABC transporter ATP-binding protein
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
vcb
Varibaculum cambriense
Pathway
vcb01501
beta-Lactam resistance
vcb02010
ABC transporters
vcb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CYK25_006085
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CYK25_006085
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CYK25_006085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcb02000
]
CYK25_006085
Transporters [BR:
vcb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
CYK25_006085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
ABC_ATPase
SMC_N
nSTAND3
NACHT
ATP-synt_ab
RsgA_GTPase
ATPase
AAA_25
AAA_23
Sigma54_activat
DO-GTPase2
MobB
AAA_22
nSTAND1
AAA_16
NTPase_1
DUF87
MMR_HSR1
NB-ARC
Hpr_kinase_C
APS_kinase
AAA_24
AAA_5
NPHP3_N
CbiA
PRK
Motif
Other DBs
NCBI-ProteinID:
WIK87800
LinkDB
All DBs
Position
complement(1308771..1309715)
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AA seq
314 aa
AA seq
DB search
MNQNNQKDQIMAADSDQNDAVSKAVAGSENATPEPLLEVKDLEVTFQSTTGVVPAVRKAN
LTLYRGQTVAIVGESGSGKSTLAMSIIGLLRGTGKVAGGSIKFDGRELTTLTEKEMQQVR
GAQIGMVPQDPMSNLNPVWKIGSQVAEALKYNEATKGGNIHEQAMKALSDAGLPDAEARS
KQYPHEFSGGMRQRALIAIGLAAGPQLLIADEPTSALDVTVQRRILDHLEKETQELGTST
LFITHDLGLAAERASHLVVMHRGRVVESWACPGNLERSPPSLYPAFGKCSAFAGVSADRN
QLFSCRGRGHQRYY
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcaaaataaccaaaaggatcagattatggcagctgactcggatcagaatgatgcc
gtcagcaaggcggtggcaggtagtgagaatgctacccccgagccgttactggaagtaaaa
gacttagaagttactttccagtccactaccggggtggttccggcggtacgtaaagctaat
ctcactctctatcgcgggcagaccgtggcgattgtaggggagtccggttccggtaaatcc
accttggctatgtcaataatcggcctgttgcgcggtaccgggaaagttgccggcggatcc
attaaatttgatggacgggaactaactactctcactgagaaagagatgcaacaggtgagg
ggagcccagattgggatggttccgcaagatcccatgtcgaacctgaatcccgtttggaaa
attggttcccaggtagccgaggcgctgaagtataacgaggccactaaaggcggaaatatc
catgaacaggccatgaaagccttatcggatgccggcctgcctgatgcggaggcacgttct
aaacagtatccgcacgagttttccggggggatgcgtcagcgtgcgctgattgccatcggt
ttagcggccggaccacagctgctaatcgctgatgaacccacgagtgcgctggatgtaacc
gtgcaacggcggatcctagatcacttggaaaaagaaacccaagagctggggacctccact
ttgtttattacccacgacttggggctggcggcggagcgtgcctcccacctggtagttatg
caccggggacgggtagtagagtcatgggcctgcccgggaaatcttgaacgatccccgcca
tccctatacccagcgtttggtaaatgcagcgccttcgctggcgtctcagcggatcgaaat
caattattctcctgccgaggacgaggccaccagcggtactattga
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