Varibaculum cambriense: CYK25_006165
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Entry
CYK25_006165 CDS
T09090
Name
(GenBank) nickel-dependent hydrogenase large subunit
KO
K06281
hydrogenase large subunit [EC:
1.12.99.6
]
Organism
vcb
Varibaculum cambriense
Pathway
vcb00633
Nitrotoluene degradation
vcb01120
Microbial metabolism in diverse environments
vcb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00633 Nitrotoluene degradation
CYK25_006165
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CYK25_006165
Enzymes [BR:
vcb01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.99 With unknown physiological acceptors
1.12.99.6 hydrogenase (acceptor)
CYK25_006165
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Motif
Pfam:
NiFeSe_Hases
Motif
Other DBs
NCBI-ProteinID:
WIK87815
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Position
complement(1324484..1326226)
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AA seq
580 aa
AA seq
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MAEKVVIDPLTRIEGHLRIEMETEGEQIKKAWSVSTQFRGIETIVQNRDPRDVWAFVQRI
CGVCTSVHAIASITAVEDAIGSNPPENARLIRSLVLGSQEIQDHVIHFYHLHALDFVNVP
NAAKADPAKALEFAHSIGSKWRGNNLKRFTEVRDTVKKILESGQLSVFTGGYWDHPDYRL
PPEADLMCVAHYLDALEFQRSMIRINTVFGGKNPHPNFLVGGMACSIDPQSSESINQVQM
DQVKTWVEEINEFVKDCYYPDILALGGVYKDYFDIGATHPNYLAVGLAGSMFAGDPNKSR
LSSPHTAIKPGVIFDDDLTKVHPFDPHKIEEFITSAWYEYSVGDKKGLTPDKGETTVKYT
GPQPPFKWLGDRDKYTWSKAPRYDGKPMQVGPVARMLLAYAQGYEPVKKLLDGAIATLGI
TPKQINSTMGRTFARAAEAVVSADLMREDYNALVKNIKEGDIDVFDASKWEPSRWPAEAQ
GYAFIEVARGDLSHWVSIKDGKVDRYQAVVPTTWLAGGRDAQGVTGPYEESLMGTGTHPL
VDPKAPLEPMRTIHSYDPCMSCGVHILDPDGNLLGEAVTS
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaagtagttatcgacccgttaacccgcattgagggacatctgcgtatcgag
atggaaaccgaaggcgagcagattaaaaaggcctggagcgttagtacccagtttcgaggg
atcgagactatcgtccaaaatcgcgatcctcgggatgtatgggccttcgtccaacgtatt
tgtggggtttgcacttcggttcacgcgattgcttccattaccgcagtagaagatgctatc
ggttccaatcccccagaaaatgcgcggttgatccgctcgctggttttggggtcacaagaa
atccaggatcacgtgattcacttctatcacttgcatgctttggacttcgttaatgttccc
aatgcggcgaaggcagatccggctaaagcactggagtttgcccactccatcggttctaaa
tggcggggcaataacctcaagcgcttcaccgaggttcgggacacggtgaagaaaatcctg
gagtccggacagctttcggtgtttaccggcgggtactgggatcacccagattatcgtctt
cctcccgaagcagatttgatgtgcgtggcgcactatctggatgctttagagttccaacgc
tccatgattcgtatcaatacggtattcgggggtaagaacccgcatccgaacttcttggtg
ggcggcatggcctgctcgattgatccgcagtcttctgaatccattaaccaggtgcaaatg
gatcaagtaaaaacctgggtagaagagatcaacgagttcgtcaaggattgttactacccg
gatattttagccttgggtggggtttacaaagactacttcgatatcggcgctacccatccg
aattacctggcagtggggctagccggatcgatgtttgcgggtgatcccaataaatctcgt
ctttcctcaccgcacaccgccattaagccgggagtcatattcgacgatgatttaaccaag
gttcatcctttcgacccccacaagattgaagagtttattacttctgcttggtatgagtat
tcggtgggagacaagaagggactaactcccgacaagggagagaccacggtaaaatacacc
ggtccgcaaccgcctttcaaatggctaggtgaccgtgataaatacacttggtcgaaagct
cctcgctatgacggtaagccgatgcaggtcggcccggtcgcgcggatgcttttggcctat
gcccaaggatacgaaccggttaagaagctgctcgacggagcgatagctaccttaggtatt
acccccaaacagattaactctacgatgggacggacttttgctcgggcggcggaagcagta
gtgtcggccgatctcatgcgcgaggattacaatgctctggttaagaacatcaaggaaggc
gatattgatgttttcgatgccagtaagtgggagcccagtcgttggccggccgaagcgcaa
ggatatgccttcattgaagttgcccggggagacctatcgcactgggtatcaatcaaggat
ggaaaggtggatcgctaccaagcggtagttcctactacctggctggcaggagggcgcgac
gctcaaggagttaccggcccctacgaggaatccctgatggggacaggaactcatccgctg
gtggatcccaaggcccccctggaaccgatgcgtactattcattcctatgatccctgtatg
tcctgtggggttcacattctcgatcccgatggaaatcttctgggtgaggcggtaacgtca
tga
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