Varibaculum cambriense: CYK25_006170
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Entry
CYK25_006170 CDS
T09090
Name
(GenBank) hydrogenase small subunit
KO
K06282
hydrogenase small subunit [EC:
1.12.99.6
]
Organism
vcb
Varibaculum cambriense
Pathway
vcb00633
Nitrotoluene degradation
vcb01120
Microbial metabolism in diverse environments
vcb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00633 Nitrotoluene degradation
CYK25_006170
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CYK25_006170
Enzymes [BR:
vcb01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.99 With unknown physiological acceptors
1.12.99.6 hydrogenase (acceptor)
CYK25_006170
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Motif
Pfam:
NiFe_hyd_SSU_C
Oxidored_q6
DUF7269
DUF6066
Tn916-Xis
VCX_VCY
Motif
Other DBs
NCBI-ProteinID:
WIK87816
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Position
complement(1326226..1327461)
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AA seq
411 aa
AA seq
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MSYEIKPWREGTLADNLASAGVSRRDFVKYCAGLAAIFAVGTPQMAHAAPAQKAAEELAD
KLGAITKPNVVWLQLQECTGCMESALRSGGTTVEEVVLNLLSVNYNELLMAAAGEAAEEA
LAETNAKKHILVVNGSVPTKDGGIYCTIGGKTAEQVLRESAENADIILAVGACAVYGSVQ
AAKPNPTGAVGVDEIIKDKAVINVSGCPPIGEVITASLTYILTHGKPPEVDSEGRPLFAY
GQRIHDSCPRRPHFDAGQFVRTFDDAGAREGWCLYDVGCKGPSTFSPCPIVQWNMKAGWP
IGAGHPCIGCTERDFFDRFSPFYQVLPNVPGFGVEATAEKVGLGFTGAVAAGVAVHAGVT
AVRAAADRKATRNSPMAAFGDATDVDTEPPSPEETPNAEVPKDSEKNSEAK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgagataaaaccgtggcgggagggaaccctcgccgataacctcgccagcgcc
ggggtcagccgacgagatttcgttaaatactgtgcgggcttggcagcaatctttgctgtg
ggtaccccccagatggcgcatgcagctccggcgcaaaaagccgccgaagaattggccgac
aaactaggggcgatcaccaaacctaatgtggtgtggctccagctccaagagtgtaccggc
tgcatggaatcagctttgcgcagtggcggtaccaccgtagaagaagtggtactgaaccta
ctttcggtgaattacaacgagctgctgatggccgccgcgggagaagctgcggaagaagct
ttggccgaaaccaacgccaaaaagcatattttggtagttaacggctctgttcctactaaa
gatggcggtatctactgcaccataggtggcaaaactgcggaacaggttctgcgggaatcg
gccgaaaacgcagacataatcttggcagtgggagcctgcgcagtctacggttcggtgcag
gcggcgaaacccaaccccaccggggcagtaggggtagatgaaatcattaaagataaagcg
gtgataaatgtttctggttgccccccgattggggaagtaatcactgcctccctaacctat
atcttgacccacggcaagcctcccgaagttgattctgaagggcgtcccctcttcgcctat
ggtcagcggatccatgactcctgtccgcgtcgcccccattttgatgccgggcaattcgta
cgtacctttgacgatgccggagctcgcgaaggttggtgcctgtacgatgtgggctgtaaa
ggcccctctacctttagcccctgcccgattgtgcagtggaatatgaaagcaggttggccg
attggtgccggtcacccctgtatcggctgcaccgagcgtgactttttcgaccgtttctca
ccgttctatcaagtcctgccaaacgtccccggattcggagtggaagctactgccgagaag
gtgggattgggctttaccggagcggtggcggccggtgtcgctgtgcacgcgggagttacc
gccgttagagctgcagcagaccgaaaagccacccggaattctccgatggctgcctttggg
gacgctaccgatgttgataccgaaccaccttccccagaggaaactcccaacgcagaagtt
cctaaggacagcgaaaagaacagtgaggcgaagtaa
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