KEGG   Varibaculum cambriense: CYK25_006310
Entry
CYK25_006310      CDS       T09090                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
vcb  Varibaculum cambriense
Pathway
vcb00740  Riboflavin metabolism
vcb01100  Metabolic pathways
vcb01110  Biosynthesis of secondary metabolites
vcb01240  Biosynthesis of cofactors
vcb02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vcb00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    CYK25_006310 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CYK25_006310 (ribD)
Enzymes [BR:vcb01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     CYK25_006310 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     CYK25_006310 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: WIK87840
LinkDB
Position
complement(1356501..1357655)
AA seq 384 aa
MRGSTGSYACMASARAQASSEHALSEEDYLLALSMPPKAALTHALAAASKAALQGPRTGG
NPQVGCAILSPAGRIISVGYHRGAGSAHAEVDALANLKEDTGSAPLTAVVTLEPCNHSGK
TPPCTRALIKAGIKNVIWAADDPNPKAAGGGEYLSRQGINAQPASAVGIEENVLAKARAV
SAHWVQATRRGRPWTIAKVAQTLDGYCAAQDGSSQWITNRLSRAYAHRIRSRVDVIIAGT
GTVIADNPQLSARLADGRDLPHQPRPLIVGRRDIPADFYLSGKAEQARTHELKAVLESCY
QRGEIFALLEGELTLVTAALKANLVDELHIYLAPRLLGAGRRGIGDLGITALKGSRDFHL
RQVKELGGDVFLALEKEGAACLPD
NT seq 1155 nt   +upstreamnt  +downstreamnt
atgagaggcagcacgggcagttatgcctgcatggcgtctgcgcgcgcccaagcctcctcg
gaacacgctctaagcgaggaggattatttgttggcgctttcaatgccccctaaagctgcg
cttactcacgctctcgcagccgccagcaaagctgccctgcaaggcccgcgaaccggagga
aatccccaggtgggctgcgctattctttcgcctgccggtcggattatctcggtgggatat
caccggggagccggaagtgcccacgccgaagtagacgccctcgccaatttgaaagaagat
accggatcggctccgctaaccgcggtagtcaccctggaaccctgtaaccatagcggtaaa
actcctccctgcacccgcgccctgattaaagcggggatcaagaatgttatttgggcagcc
gatgaccctaacccgaaagctgctggtggcggggaatatttaagccgccagggtattaat
gcccagccggcaagcgcagtagggattgaggaaaatgtcctcgctaaggcccgggcagtt
agtgcccactgggtgcaagctactaggcgcggccgcccctggacgattgcgaaagtagcg
cagactctggacgggtattgcgccgctcaggacggatctagtcagtggattaccaaccgg
ctctcgcgtgcctacgcgcaccgcattcgttcccgggttgatgtaattattgccggcacc
ggcactgtcattgccgataacccgcagctgtccgcccgcctagccgatggtcgcgatctc
ccgcaccagccgcgccccctgatagttggcaggcgcgatattcccgcagatttttactta
tccggcaaagcggaacaggcgcgcacccatgaactaaaggcggtacttgaaagctgctat
caacgcggagagatttttgcgcttctggagggcgagcttaccttggtaactgcggcgcta
aaggcgaacctggttgatgaactgcatatttatcttgctccgcggctattgggggcagga
cgccgggggataggtgacctggggattaccgctttgaaaggctcccgggatttccatttg
cgacaggttaaagagttaggcggagatgttttcttggcgttagaaaaggaaggggcagca
tgtttaccggactag

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