Varibaculum cambriense: CYK25_006380
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Entry
CYK25_006380 CDS
T09090
Symbol
gatB
Name
(GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
vcb
Varibaculum cambriense
Pathway
vcb00970
Aminoacyl-tRNA biosynthesis
vcb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CYK25_006380 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
vcb03029
]
CYK25_006380 (gatB)
Enzymes [BR:
vcb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
CYK25_006380 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
CYK25_006380 (gatB)
Mitochondrial biogenesis [BR:
vcb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
CYK25_006380 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
YqeY
Motif
Other DBs
NCBI-ProteinID:
WIK87854
LinkDB
All DBs
Position
complement(1371485..1372981)
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AA seq
498 aa
AA seq
DB search
MSDLMKYEDAVAEFDPVLGLEVHVELGTKTKMFDSAPNSSLGEPNTRVTPVSVGLPGSLP
VANERAVEYAIKIGLALNCEIAPFCRFARKNYFYPDLAKAYQISQFDEPIAHDGYVDVEL
DDGEIFRVNIERAHMEEDAGKNTHIGGDAGRIQGAAYSLVDYNRAGVPLVEIVSRPIEGA
GAKTPQVAAAYVRTLRDIFRALEVSEARMERGNVRADVNVSLRPSPDAPLGTRTETKNVN
SFKAIEKTVTFEIRRQAKILSEGGKVIQETRHWHEDTSSTSAGREKSDAEDYRYFPEPDL
VPVAPAKEWVEELRANLPELPVARRRRLREEYGFSDMEMRDVVNADALDIIEATVEAGAA
PQAARKWWMGEISRIAKEKNLDLEQVAAKPADVAQLQDLVDQGKLNDKLARKVIAGVLEG
EGTPAEVMKARGLEIVRDTAALEAAVAQVIADNPKVVEQIKGGKVKAIGALMGGVMRATK
GQADAGEAREMILKQING
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacttaatgaaatacgaagatgcagtagccgagtttgatccggtattgggactg
gaagtccacgtcgagttgggtaccaaaaccaaaatgtttgatagcgccccgaactcttcg
ctgggtgaacccaacacccgggtaaccccggtttcggtggggttgcccggatccctgccg
gtagctaacgagcgggcggtggaatacgcgatcaagatcggcctggcactcaactgcgag
attgcccccttctgccggttcgcgcgcaaaaactatttttaccccgacctggcgaaggcc
taccagatttcccaattcgatgagcccatcgcccatgacggctacgtagatgtagaactc
gatgatggagaaatcttccgggtcaatattgaacgcgcccatatggaagaggacgccggt
aagaacacccacatcgggggagatgccggacgcatccaaggcgccgcctattccctggtg
gattataaccgcgccggggtgccgttggtagaaatcgtttctcgtcctatcgagggtgcc
ggtgcaaaaaccccgcaggtagcagcggcttatgtgcgcaccctgcgcgatattttccgg
gctttggaagtttccgaggcgcggatggaacgcggaaacgtgcgcgctgacgtgaacgtg
tccctgcgtcccagccccgatgctcccttgggaactcgcactgagactaagaacgtgaac
tcgtttaaggcgattgaaaaaacggttaccttcgagattcgccgccaggcaaagattctt
tctgaaggcggcaaagttatccaggaaactcgtcactggcacgaggacacttcctccact
tctgccgggcgggaaaaatccgatgccgaagattaccgttacttcccggaaccggatcta
gtgccggtagcgcctgcgaaagaatgggtggaagagctgcgcgctaacctgccggaactg
ccggtagcccggcgccgccgcctacgcgaagaatacggtttctccgatatggaaatgcgg
gacgttgtaaacgcggatgctttggatattatcgaggccacggtagaggcgggcgccgct
ccgcaggccgcgcgcaaatggtggatgggggaaatctcccggattgccaaagaaaagaac
ctggatcttgaacaggtagcggctaagcctgccgatgtagcgcagctacaagacctggtt
gaccagggtaaactcaacgataagttagcgcgtaaggtgattgctggggtacttgaaggt
gaaggcacccccgcagaagtgatgaaagcgcgcggactagaaatcgtgcgcgatactgct
gccctagaggcagcggtcgcccaggtgattgcagataacccgaaagtggtagagcaaatc
aaaggcgggaaagtcaaggcgattggcgccctcatggggggagttatgcgcgccaccaag
gggcaagccgacgccggtgaagctcgggaaatgatcctcaagcaaatcaacggctag
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