Varibaculum cambriense: CYK25_006460
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Entry
CYK25_006460 CDS
T09090
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K27043
XRE family transcriptional regulator, stress-response regulator
Organism
vcb
Varibaculum cambriense
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcb03000
]
CYK25_006460
Transcription factors [BR:
vcb03000
]
Prokaryotic type
Helix-turn-helix
XRE family
CYK25_006460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_31
HTH_3
HTH_19
HTH_25
Motif
Other DBs
NCBI-ProteinID:
WIK87867
LinkDB
All DBs
Position
complement(1390195..1390515)
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AA seq
106 aa
AA seq
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MDMTDKDAGNKTPLLREEIGQVLRMVRRSQGRTLREVSTSAQVSLGYLSEVERGQKEASS
ELLAAICNALEVPMAMVLREVSLRVAVAEGLSVRRQVPEVPVHSVV
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atggatatgacagacaaagatgcggggaacaagactccgttgctgcgcgaagagattggg
caagtgttacggatggtgcgccgttcccagggtcgtaccttgcgggaagtttccaccagt
gcccaggtgtctttggggtatctttctgaggtagaacgcgggcaaaaagaagcctcgtcg
gaactgctggccgctatttgcaatgctctcgaggttccgatggcgatggtgctgcgggaa
gtttccttgcgagtggcagtagcagagggtctctccgtgcgtcgccaggttccagaagta
ccagtacattcggtagtctag
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