Varibaculum cambriense: CYK25_006480
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Entry
CYK25_006480 CDS
T09090
Symbol
lysX
Name
(GenBank) bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
vcb
Varibaculum cambriense
Pathway
vcb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CYK25_006480 (lysX)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vcb01007
]
CYK25_006480 (lysX)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcb03016
]
CYK25_006480 (lysX)
Enzymes [BR:
vcb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CYK25_006480 (lysX)
Amino acid related enzymes [BR:
vcb01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CYK25_006480 (lysX)
Transfer RNA biogenesis [BR:
vcb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CYK25_006480 (lysX)
Prokaryotic type
Other AARSs
CYK25_006480 (lysX)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
LPG_synthase_C
tRNA-synt_2_TM
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
WIK87870
LinkDB
All DBs
Position
complement(1395541..1398867)
Genome browser
AA seq
1108 aa
AA seq
DB search
MRVAGKEKSNSSWRQRVPAWMGWIYTIAALFCLVMIPFRYAVGHHIGRFTYLVLTVLGVP
STATLGTAVLLAFLALLCFSRKRIGVIVLIALQALHGLLCLVALIFSFSDSDFDLTDQII
LGTRLAIAALIMAVLFASARSFWGKINAQSAWKALVILISGQLLVFGIGFAMARVIAPRS
WASSPLAIWVYSRMSGLRLHRGLAIHFMFAHQPGFRALSFFIMVLSGLVMMIAANRFILG
QRVKARTRSEDLALRSLLIKWGKADSLSYYATRDNRAVIFSADGQAVVSYGVALGVALAA
GDPIGDPSSWENAVQRWKSYCYRQGWIPAVISASAQGARIYRNQGLRVRKMGDEAIISPE
RFEHNSSAGRALLAAQRRVARAGVEIEIRRQGELSPAQLREVAMVAELFRRGNERGFSMS
LDRMFAPQESEQLIVTARGKDGQLQCLLTFVPWGQRAVSLNLMRRAESAVNGVVEAMVLT
LLQQGSEKGIERFSLNFAMFREIFVEGEAVDATINDRVKRALFVKASRFWQLESLYESNA
RYNPKWLPRYFCFSSDPLVPLSLIAAGMLEGFVPAPQASVRGEPFDWEVDSQYLSELEAM
RSDYTAAKLQVKLSEQQRSRRAKAEKLSAAGIESFPAGFDLGMPLSQAKAQVDEGEGEAA
IRTFGRIVARRNHGGVVFWDLYYQGYYLQVVLERRNLPPEQFAHLRLLDLGDLIVVSGRC
GASRRGTPSLIAENWTLAAKALRPIPHPAARLDISTRTRERTMTLLNDAAAMRRLQARSR
ALSAVRKELIERGYLEVETPMLQAVQGGANARPFVTHSNAYQVNMFLRIAPELYLKRLAI
AGMGAIFEMGRSFRNEGADATHNPEFTSLEVYKAGSDYREMMTLTRELYQAAARAIHGKE
IALRPINPEDAGTGSSDAEFEEVDISGQWRVISVFEAVSQAVGTTVTPDTGEEELRSLCV
EHHLTPPPGANCGTLLGTLYDELVEARTVKPTFYCDFPVESSPLTRRHRTDPRLAERWDL
VAFGMELGTAYSELTDPRDQRERFTQQSLAAAAGDPEAMSLDEDFLNCLELGMTPLGGLG
LGMDRMAMMLLGCDIRQVLAFPFVKPRN
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtagcaggaaaagaaaaatccaatagttcttggcgtcagcgcgtccccgcctgg
atggggtggatctatactattgccgccctattttgcctggtaatgattccgttccgctat
gccgtcgggcatcatattgggcgttttacctacctggtgctaaccgttctgggagtaccc
tctaccgctactttagggactgcggttttattggctttcttggcgctgctatgtttttcc
cgcaaacggatcggagttatcgtcctcattgccttgcaggctctgcacggtctgctctgc
ctggtagctctgatattttctttctccgactccgactttgacctgacagaccagatcatc
ctgggcacgcgtctggcgatagcggcgttgattatggcggtgctattcgcatcggcgcgc
agtttctggggaaaaatcaatgcccaatccgcctggaaagccctggttattctaataagc
ggccagttgctggtgtttggaattgggttcgccatggctcgggtgattgcaccgcgcagt
tgggctagtagtcccctggcgatttgggtctactctcgcatgtcaggtctgcgactacac
cggggcctggccatccatttcatgtttgcccaccagccaggttttcgcgctctcagcttc
ttcatcatggtgctttcgggcctggtaatgatgattgccgccaatcgttttattctcggt
caacgggtaaaggctcgcacgcgcagtgaagacctagcgttacgtagcctattaataaaa
tgggggaaagctgattccttaagctactatgccacccgcgataaccgggcagtgattttt
agtgccgatgggcaggcggtggtttcctacggggtagctctcggggtggccttagcggcc
ggagatccaataggagatccttcttcctgggaaaacgcggtgcaaagatggaagtcctac
tgctatcgccaaggatggattccggcggtaatttctgctagcgcccagggggcacgtatc
taccgtaaccaggggcttagggtacgcaaaatgggggatgaagccattatcagccccgaa
cgttttgaacataactctagcgccggacgtgccttgcttgcggcacaaagaagggttgcc
cgggcaggggtagagatcgaaatccgcaggcaaggcgaactttctccggcacagctgcgg
gaagtggcgatggtggcggagctgttccggcggggtaatgaacgcggcttctctatgagt
ctcgatagaatgtttgctccccaagaaagcgaacagctgatcgtaaccgcgcggggcaaa
gacggacagttacaatgcctgcttactttcgttccctgggggcagcgtgccgtttccctt
aatctaatgcgccgggcagagtcagcggtcaatggggtagtagaagccatggtgctcacc
ctgctgcaacaaggctccgaaaagggcatagagcgtttctcgttaaacttcgcgatgttt
agagaaatttttgtagagggcgaggccgttgacgctactatcaatgatcgggttaagcgc
gccctgtttgtgaaagcctcccgtttttggcaactggaatccctctatgaatccaacgcc
cgttataacccgaaatggttgccgcgctacttttgtttttcttccgaccccttagtgccc
ttatcgcttatcgccgcgggaatgttagaagggtttgtgcccgcgccgcaggcttccgtg
cgcggggagccctttgattgggaggtagatagccagtaccttagcgagctggaagcgatg
cgcagcgactacaccgccgccaagctgcaggtaaaactgagtgaacagcaacgctcccgg
cgggcgaaagccgaaaagctcagtgcggcgggaatagaatccttcccggcaggtttcgat
ttagggatgcccctatcacaggcgaaagcccaggtagacgagggtgagggtgaagcagcg
attcgcacgtttggtcgaattgtggcgcggaggaatcacggtggggtagtgttttgggat
ttgtactaccaaggctactacctccaggtagtgctggaaagacgaaacctgcccccggaa
cagttcgctcatctgcgactactggacttaggtgacctgatagtagtcagtggccgctgt
ggagcctcgcgcagaggcacgccctccttaatagcagaaaactggacgctggcagcgaaa
gccttgcgtccaattccccatcctgctgcgcgcctagacatttccacccgcacccgcgaa
cgcaccatgactttgctcaatgatgccgcggccatgcgccgactacaggcacgctcgcgg
gcattaagcgcggtgcgcaaagaactgatagaacgcggctacctggaggtggaaaccccc
atgttgcaggcggtccaaggcggtgccaatgcccgtcctttcgttacccattccaatgcc
taccaggtaaatatgttcttgcggattgccccggaactatatctaaaacgtctggccata
gcggggatgggggcaatcttcgagatgggacgctcctttaggaacgagggcgcggacgcc
actcacaaccccgagttcacctctctggaggtctataaagccggatctgattaccgagag
atgatgactttgacccgcgagctttaccaggcggccgcgcgggcgattcacggtaaagaa
attgcattacgcccgataaatccggaagatgctggcaccggtagcagcgacgcagaattt
gaggaagtcgatatctctggccagtggcgggtaatctcggttttcgaggcagtatcacaa
gcggtgggaaccacggttactcccgacaccggcgaggaagagctccggagcctgtgcgta
gagcaccacctcaccccgccgccgggcgccaattgcggtaccttgctggggacgctatat
gacgagctggtagaggcacgcacggtaaaacccaccttctactgtgatttcccggtggag
tcttctccgcttacccgccggcaccgcactgacccccgcttggcagaacgctgggatctg
gtggctttcgggatggagctgggaactgcctacagcgaactaactgacccgcgagaccag
cgcgaacgctttactcagcagtcgctagcggccgcggcgggcgatccggaagctatgagc
ctggatgaggatttcttgaactgtttggaactgggaatgacccccctgggcgggttagga
ctgggaatggatcggatggcgatgatgttgctgggctgtgatatccggcaggtgttggcg
ttcccattcgttaaaccccgaaactaa
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