Varibaculum cambriense: CYK25_006485 Help Entry CYK25_006485      CDS       T09090                                  Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism vcb  Varibaculum cambriense Pathway vcb03018   RNA degradation Brite KEGG Orthology (KO) [BR:vcb00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     CYK25_006485  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vcb03019]     CYK25_006485 Messenger RNA biogenesis [BR:vcb03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      CYK25_006485 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 Mur_ligase_C Motif Other DBs NCBI-ProteinID:  WIK87871 LinkDB All DBs Position complement(1398868..1400559) Genome browser AA seq 563 aa AA seqDB search MNPLYPELSLPPKLKSDTIRVVPLGGLGEVGRNMTVIELNGKILIVDCGVLFPEEIQPGV DLILPDFSYLQGRMDDVVALVLTHGHEDHIGAVPYLLRLREDIPIYGSQLTLDFLRPKLE EHRLPATHLHQVREGEHIELDIFACEILAVTHSIPDALAVMIRTKAGNLLVTGDYKMDQL PLDKRITDLRGFARMGEEGVDLFLVDSTNAEVPGFIAPERKIGPVIRQVLSESTGQVIVA SFASHVHRVQQVLDAARAVGRKVCLSGRSMERNMNIAAQAGYLDLDPEVVVRADDLKRLP PKKRVWMVTGSQGEPMAALSRIAQGEHRFVSLEPEDTVLLASSLIPGNENSVYRVINALM RQGANVVHKGNRAVHVSGHAAEGELLYTYNIVQPKNVMPIHGEIRHLIANGKIAQATGVP EENVALAEDGVVVDLKDGQARVVGQVDCEYVYVDGGSIGEINEDQLKDRMTLGEEGFVSV FAAVDVPTKIIAAGPHITARGMAEDEGVFREVLPDVTEALQRALNQGDSDPYRLQQAMRR ALGRWVARRLRRRPMIVPVVVEI NT seq 1692 nt NT seq  +upstreamnt  +downstreamnt gtgaatccgctgtatcctgaactttctttaccgccgaaactcaaatccgacaccatccgg gtagttcctctgggaggcctgggggaagtcggccggaacatgaccgtaatcgagctaaac ggcaaaatcctgattgtagattgcggggtacttttccccgaagaaatccaacccggtgta gatctgattctccccgacttttcctatctgcaaggacgcatggatgacgtagtcgcgctg gtgctcacccacggtcacgaagatcatatcggggcggtaccctatctgctgcgtctgcgc gaagacatccccatctatggttcccaactcaccctggattttctgcgccccaaactggaa gaacatcgcctcccggcgacgcatctgcaccaggtacgcgagggagagcatattgagcta gatattttcgcttgtgaaattttggcagtcacccactcgattcccgatgctttagcggtg atgatccgtaccaaagctggaaatctcctggtcactggggattacaaaatggatcagctg cccctagataaaaggatcaccgatctgcgcggctttgcccgtatgggagaagagggcgtg gatctgttcttagtggactccactaatgcggaagttcccggttttattgcgccggaacgc aaaatcggtccggtcatccgccaggtactctccgaatctactgggcaagtaatcgtggcc tccttcgcctcccatgttcaccgcgtgcaacaggtgctggacgctgcccgggcagtaggg cgcaaagtgtgcctttcggggcggtcgatggaacgcaatatgaacattgcggcgcaggcc ggatatctggacttagacccggaagtagtggtgcgcgccgacgacctcaaacgtttaccc cccaagaaacgagtgtggatggtaaccggttcccagggggagcctatggcagcgctctcg cggatcgcccagggcgagcaccggtttgtgtccctagagccagaagacacggtgctactg gcctcctctttgattcccgggaatgaaaactcggtttaccgggtgattaacgcgctgatg cgtcaaggtgccaatgtagtccataaaggcaaccgcgcggttcacgtttccgggcatgct gccgaaggggaactgctctacacctacaacattgtgcaacccaagaacgtaatgccgatt cacggcgaaatcaggcacctcattgctaacggaaaaatcgctcaagccaccggggtaccg gaagaaaacgtggcattagccgaggacggggtagtagtcgacctcaaagacgggcaagcg cgagtagtgggacaggtggattgcgaatacgtatatgttgacggcggatctatcggagaa atcaatgaagatcagctaaaggatcgcatgaccttgggtgaagaaggcttcgtttctgtc tttgccgcggtagatgtgcccaccaagattattgctgccggcccgcatattaccgctcgg gggatggccgaggacgagggggtgtttagggaagtactaccggatgtgactgaggcgttg caaagagcattaaatcaaggagatagcgatccttatcgcttgcaacaggcaatgcgtcgc gcattggggcgttgggtggcgcgccggttgcgccgtcgccccatgatcgtaccggtagtt gtggagatttag

DBGET integrated database retrieval system