Varibaculum cambriense: CYK25_007015
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Entry
CYK25_007015 CDS
T09090
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
vcb
Varibaculum cambriense
Pathway
vcb00500
Starch and sucrose metabolism
vcb01100
Metabolic pathways
vcb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
CYK25_007015 (glgX)
Enzymes [BR:
vcb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
CYK25_007015 (glgX)
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GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
Motif
Other DBs
NCBI-ProteinID:
WIK87960
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Position
1512963..1514864
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AA seq
633 aa
AA seq
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MSRRVIDDFFRPSSPFAHGGAADPTRLGVHLQGNGVDIAVVAPNASAVEICFFTSAEPTA
PETRYRLLGPVDGIWHGHVSGVLAGTYYGFRTWGPWNPERGDVFNPYKLALDPYARAISG
NVQLCSQTYAHKTDDQLYPLYPLELDPTNSAPYTVRGVVTGKEFDVVPGPAIPWENTVIY
EAHVKGLTKQLRGVPEELRGTYAGLAHPATIAYLKDLGVTAVELLPVHAKLSEAFLNERG
LSNYWGYSTLSYFAPEPSYATKNARALGPMAVLDEFRGMVSILHQNGIELLLDVVYNHTC
EGGGDGQALSWRALDNAMYYRLDSQGASIDYSGCGNTLDTGHPRVIQMILDSLRYWAGDV
GVDGFRFDLGVTCGRGEEHFTRFHPFFQACLDDPVLRNTKMIAEPWDMGPDGWRTGDFPL
PFSTWNDRFRDTVRGFWVADGRAQSRGESRGAPPFELASRLSGSQDMYGAGNIPAVRPPR
CSVNFVTAHDGFTLGDLVSYDHKHNEENLENNRDGSPNNLSWNHGSEGRAFQLDNDIEPG
VDGDSPLTELLTARVRSAMNLFTTMMISAGTPMILAGDEFARTQGGNNNAYCQDNETTWL
NWELVDWQKDFYVAVRKLITLRREHPVFRPQTT
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
gtgtccagacgagtaatagacgacttttttaggccgtccagcccctttgcgcatggcggc
gccgctgatccgacccgcctgggggtacacctgcaaggcaacggggtggatatcgcggtg
gtcgccccgaatgcttctgcggtagaaatctgttttttcacttccgcagaacctactgct
cccgaaactcgctaccggcttttaggtccggtagatggtatctggcatggacatgtttcc
ggggtattggccggaacctactatggttttcgcacctgggggccttggaatccggaacgc
ggagacgtttttaatccctataaactcgccctcgacccctatgcccgcgcgattagtgga
aacgtacagctttgcagtcaaacttatgctcataaaaccgatgaccagctgtatccgctc
tatcctttggagctcgaccccactaactcggcaccctataccgtgcgcggagtggtcact
ggtaaagagttcgatgtggtacctggcccggccatcccttgggaaaacacggttatttat
gaggctcacgtaaaagggctcaccaaacagctgcggggggtaccggaagaactacgcggc
acctacgcgggactggcacacccggccactatcgcctacctcaaggatttaggggtcacc
gccgtagaactattgccagtacacgcgaagctttcggaagcgttccttaacgagcgaggt
ttaagtaactattggggatactctaccctgtcctatttcgcacccgagccttcctatgcc
accaagaatgcccgtgccctggggccaatggcagtcctggatgagttccgcggcatggtg
tcgattctgcaccaaaatgggatcgaactgctgctagacgtggtttataaccatacttgc
gagggcggaggtgacggacaggcactttcttggcgcgccctcgataacgctatgtattat
cgcctggattcccagggtgccagtatcgattattccggttgcggtaacaccctagatact
ggccatccgcgagtgatccaaatgattctggattctttgcgctattgggctggtgatgta
ggagtcgacggtttccgttttgacctgggggttacctgcggtagaggcgaggaacatttc
actcggttccatcctttcttccaagcctgtcttgatgacccggttttgcggaatacgaaa
atgatcgccgagccttgggatatggggccagatgggtggcgcacgggagacttccccctc
cccttctctacctggaacgatcgctttcgcgataccgtccgcggtttttgggtggccgat
ggacgcgcccagtcgcggggtgaatctcggggtgctcctccctttgaactggcttcccga
ctttcgggttcccaagatatgtatggagctggcaatatcccggcagtacgtcctccccgc
tgttcggttaacttcgtaaccgctcacgacggttttactttgggggatttggtcagctac
gaccataaacataacgaagaaaacctagagaataaccgggatggatcccccaataacctg
tcttggaatcatggtagtgaagggcgtgccttccaactcgataacgatatagaaccgggg
gtagatggcgattccccgttgacagaactgctcaccgcgcgggtgcgctcggccatgaac
ctgttcaccaccatgatgatttccgcgggtacccccatgattttggccggtgacgagttt
gcccgcacccaagggggtaacaataacgcctattgccaagacaatgaaactacctggctg
aactgggaactggtggattggcaaaaagacttttatgtggcggtacgaaagctgattacc
ctgcggcgtgaacacccagttttccgcccgcaaactacttga
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