Varibaculum cambriense: CYK25_007165
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Entry
CYK25_007165 CDS
T09090
Name
(GenBank) glycoside hydrolase family 2 TIM barrel-domain containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
vcb
Varibaculum cambriense
Pathway
vcb00052
Galactose metabolism
vcb00511
Other glycan degradation
vcb00600
Sphingolipid metabolism
vcb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
CYK25_007165
09103 Lipid metabolism
00600 Sphingolipid metabolism
CYK25_007165
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
CYK25_007165
Enzymes [BR:
vcb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
CYK25_007165
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
Glyco_hydro_2
LacZ_4
BetaGal_ABD2
Bac_rhamnosid_N
DUF3344
Motif
Other DBs
NCBI-ProteinID:
WIK87988
LinkDB
All DBs
Position
complement(1553520..1556579)
Genome browser
AA seq
1019 aa
AA seq
DB search
MQLKVHHQDLKVLHENTLPARAYYIPLSSLRAAKEENRGRNFNLEREASDRFQLLNAEWN
FGFYPNLEAVPADFFAPEAAALPDRIPVPGSWQHHGYDQHQYTNINYPFPFDPPHVPHSN
PAGAYRYTFNYEQDPDAPGATLVFEGVDSCFYLWMNGKYVGYSQVTHSQSAFDVTEYLTE
GENTLAVLVFKWSDGSYLEDQDKFRTSGIIRDVYLLKRPLSHLNDYFVTTDLQDDQAEVT
LRANFSGEALDITATLSGNAGEIASCALEPFEDPQGIYTHCARFTIENPRLWHPGDPYLY
DLVMTSETEVITEKVGVREVTIEDAVLKFNGSPLKIKGVNRHDSDPDSGPVVSIEHIKRD
LQMMRRHNINAVRTAHYPNCPQLYHLCDQAGFYVMSEADNESHGTRNRLLQDESEENIVE
HWNHPIANNPEWIEATMDRMQLCVHSEKNRPSVFSWSAGNECAYGCTFEECLAWTKQFDP
SRVTHYESAFYRSTDRKYDYQNIDLYARMYPPLSDIDDYLAKLGDKPFLLVEYCHAMGNG
PGDLEEFWDKVRSDARMCGGFIWEWCDHAVRDSEGHLLYGGDSGEDPHDGNFCVDGLVSP
ERVPHIGLLEAKNVYRPLRCQYDQEGGKLLVTNTADHLNAADFTSLRWVKVVDGQEESGT
LEVPNLPAHETVEIPLRLEVPAEGRCYLRVETYLTRPMAFLEAGHSLGFDEFALKNPSPH
TPRALELLKADVEGDGTAKITEDPLEICVVSEDYTYRFSRHTGMLTGIELGGKELLKQPA
EINIWRAPTDNDMYIRPLWERARYDRAYPHAYEVRADNEARGAVIGAKVALVSPSLQPML
KADVEWIIRPDGVLQVNAKVCRDTQFPELPRLGLRFFLDKSLQQATWAGLGPHENYVDKC
RSSWHGYFESSVGDLFQNYLRPQENGTRSDCDYLRLCGEELTVEVASAEAYSFNASHFSQ
EELTEKTHDYQLTEADSTILCLDHLMAGIGSQSCGPKLLEKYRVDFETTQFSFTIRLSN
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgcagttaaaagttcaccatcaagaccttaaggtcttacacgaaaatactctcccggcg
cgggcctactatataccgctctcgtcactgcgagccgccaaagaagaaaatcggggacgt
aacttcaacttagagcgcgaagcatctgatcgtttccagctattgaatgcagaatggaac
ttcggtttctacccgaacttagaggcggtgcccgccgacttttttgcccccgaggcagcg
gcgctaccggataggattcccgtgcctggctcctggcagcatcacggttacgatcagcat
caatacaccaatatcaactatcccttcccctttgatccgccgcatgttccccatagcaat
cccgccggagcctatcgctacacctttaactatgaacaagatccggacgctccgggtgcc
actttggtttttgaaggagtagattcctgcttctacctgtggatgaatggcaaatacgtc
ggttattcccaagtaactcactcccagtcggcttttgatgtcaccgagtatctaacagag
ggagaaaacaccctggcggtactggttttcaaatggtctgatggctcctacctggaagac
caagataagttccgcacttccgggattattcgtgacgtttacctgttgaaacggccactc
tcgcatctaaatgattattttgttactaccgatttgcaggatgatcaggcagaagtcacc
ttgcgtgccaactttagtggcgaggcgctggacattaccgccaccctcagtgggaatgca
ggagagattgccagctgcgccctcgaaccctttgaggatccgcagggcatctatacccat
tgcgcccgctttactatcgagaatcctcggctgtggcatccgggcgacccctatctatat
gacctggtaatgaccagcgagaccgaagttattaccgaaaaagtgggggtgcgggaagtt
actatcgaggacgcggttctaaagttcaatggcagccccctcaaaatcaagggggttaat
cgccacgacagcgaccccgattccggcccggtagtttctatcgagcatattaagcgggat
ctgcagatgatgcgccggcacaacatcaacgcagtccgcaccgctcactatcctaattgc
ccgcagctctatcacctgtgtgaccaggcgggattttatgtaatgagcgaggctgacaat
gaaagtcacggcactcgcaaccgtctgttacaggacgaatctgaagaaaatattgtggag
cattggaaccatccgatagccaataatcccgagtggatagaggccacgatggatcggatg
cagctgtgtgtgcactcggaaaagaatcgtcccagcgtgttttcttggtcagccggtaat
gaatgcgcctatggatgtacttttgaagagtgcttggcttggacaaagcagttcgatccc
agccgggtaactcattacgaaagcgcgttctatcggtctaccgaccgcaaatatgactac
caaaatattgacctgtatgcgcggatgtatccgccgctatctgatattgacgattacctg
gcaaagctgggggacaaacccttcctcttagtcgaatactgccacgccatggggaacggt
ccgggcgacctagaagagttctgggacaaagtgcgttccgatgctcgcatgtgtggcggt
ttcatctgggaatggtgtgaccatgccgtaagggatagtgaagggcatctgctttacggt
ggcgatagcggcgaagatccccacgatgggaacttctgtgtagacgggttggtatcccca
gagcgcgtgccccatatcggtctgctagaagccaagaatgtctatcgccctttgcgctgt
caatatgatcaagaaggcggaaaactgctggttactaataccgccgaccacctaaacgcc
gccgattttacctctttacgctgggtaaaagtggtagacgggcaggaagaaagcggcact
ttggaagtacccaatttgcccgctcatgaaacggttgagattcccttgcggttagaagtg
cctgcggaaggacgctgctacctgcgggtagaaacctatctgacccgccccatggcgttc
ctggaagctggacattcattagggtttgacgagttcgccctcaagaatcccagcccgcac
actcctcgcgccctggagctattaaaagcggatgtcgagggagacggcacagctaagata
acggaagatcccctagaaatatgcgttgttagtgaggattacacttaccgcttctcgcgt
cataccgggatgctgactgggattgagctaggtggaaaagaactattaaagcagccggct
gaaataaatatttggcgggctcccaccgataacgatatgtatattcgtcccctctgggag
cgggcgcgctatgaccgtgcctacccgcacgcttatgaggttcgcgctgataatgaagcc
cggggcgcggtgatcggcgccaaagtggcgctggtgtcacctagcttgcagccgatgctg
aaagccgatgtggagtggattatcaggccagacggagttttacaggtaaacgcgaaggtg
tgccgggatacccaattcccagaactgcctcgcttgggtctgcgcttcttcctagataaa
tccctacagcaagccacttgggcagggctgggtccgcacgaaaactacgtcgacaagtgc
cgctccagttggcacggatattttgaatcttcggtgggagatttgttccaaaactatttg
cgtccgcaagaaaacggaacccgctcagactgcgattatctgcgtctttgcggggaagaa
ctaacggtagaagtagcaagcgcagaagcatattccttcaacgcttctcacttcagtcag
gaggaactgaccgaaaaaactcacgactatcagttaacggaagctgatagcaccatcttg
tgtctggaccacctgatggcaggaatcggttcgcaaagctgcggaccgaaactgctggaa
aaatatcgggttgatttcgagaccacccaattctctttcactatccgtctttccaactaa
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