Varibaculum cambriense: CYK25_007345
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Entry
CYK25_007345 CDS
T09090
Name
(GenBank) ABC transporter ATP-binding protein
KO
K14698
ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
Organism
vcb
Varibaculum cambriense
Pathway
vcb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CYK25_007345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcb02000
]
CYK25_007345
Transporters [BR:
vcb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CYK25_007345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
ABC_ATPase
AAA_16
AAA_22
AAA_25
RsgA_GTPase
AAA_29
AAA_24
AAA_33
AAA_21
AAA_28
Motif
Other DBs
NCBI-ProteinID:
WIK88018
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All DBs
Position
complement(1593438..1595225)
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AA seq
595 aa
AA seq
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MDDSVTDQVVEGEYGSAKEKSVAGQNAIRQLSQPVKGKLFVAQVLAFASGVLAIAPYVAL
VELGRELMQDQVDPARVNWIVMLLVSAYMTRLTLYFVALGVTHFIDLSLRNQMRRQIAAR
MSTAPLSWFTREGEGKIRKTIQDDTATVHTVIAHGPIEKLNAIVSPLALLMYAFVVDWRL
ALLSIATIPIYVGMYGMSMRGMNEKTAQMDTKLAQVSATMAEFVAGISVVKAFGKVGQAH
KAYLDAANEFSKFYRAWCMPLVSMSVASFSWVSIPVLLIVNLGGGALMMNAGWVSIYEVI
ATTLIALVLPGALMTVATIAWSYQLAGSAAVRLVNVMELPALSQPDAPQTPHGHDIEIRG
VSYAYDDTQALDEVSLSIPAGTVTALVGPSGAGKSTLASLMARFDDPDAGTITIGGVDLK
NISQDVLYSTVAFVLQDAQLIRDTIHNNISLGAPDATLDQVRQAARAAQIDEFIMSLPDG
YDTVLGEDTHVSGGQAARIAIARALMVDAPVLVLDEATAMADPESESKIQQALSTLAKGR
TVIVIAHRLASIRGADQIVVMERGRIAVVGKHDELLGNAHYQALLAQGACEEMTR
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
gtggacgatagtgtaacagatcaggttgttgaaggcgagtatggatccgcgaaggaaaaa
tctgtcgctggccagaacgcgatccgtcagctatcgcagccggtgaaaggcaaactgttc
gtcgcgcaggtcttagcgttcgcctccggggtgttggccattgccccgtatgtggctttg
gtggagcttggcagagaacttatgcaagaccaggtggacccggcgcgggtgaactggatc
gtcatgctcctcgtcagcgcatacatgacccggttgactttatattttgttgcattgggc
gtgacgcattttattgacctgtcgttgcgtaatcagatgcgtcggcaaattgccgcccga
atgtcgactgctccgctgtcgtggtttacccgcgagggtgaggggaagatccgcaagacc
attcaggatgatacggccacggtgcacacagtgatcgcgcacgggccgatagagaaactg
aacgcgatcgtatccccgctcgccttgttgatgtatgcgtttgtggtggattggcgactc
gcgttgctgtcgattgcgacgattccgatttatgtgggcatgtatggcatgtcgatgcgt
gggatgaatgagaagaccgcgcaaatggataccaagctcgctcaggtttcggcaacgatg
gccgagttcgttgccggtatctcagtggtgaaagcgttcggcaaggtcggccaagcacat
aaagcctatttagatgcagctaacgagttttctaagttctaccgggcgtggtgtatgccg
ctggtgtcgatgtcggtcgcctcattttcgtgggtgtcgatcccggtgttgttgatcgtg
aaccttggcggtggcgcgttgatgatgaacgccggttgggtgagcatctacgaggtgata
gcgacgacgttgattgccttggtgttgccgggagcgttgatgacagtcgcgacaatcgcc
tggtcgtaccagctcgcagggtctgcggcagtgaggctggtgaacgtcatggagctaccg
gcgttgagtcagcccgatgcaccacagacaccacacggtcatgatatcgagattcggggt
gtgtcgtatgcctatgacgacacccaggcattagacgaggtaagcctgagcattccggca
ggcacagtgaccgcgctggttggcccgtcgggtgcgggcaaatcgacgttggcaagtcta
atggcccgcttcgatgacccggacgctggcacgatcactatcggcggggttgatctaaag
aacatttcccaggatgtgttgtattcgacggttgcattcgtcctgcaagatgcacagctt
attcgcgacaccatccacaacaacatttccctgggcgcgccagacgcaaccttggatcag
gtgcggcaggcggcgagagcagcgcagatcgacgagttcatcatgagcctgccagatggt
tacgacaccgtgttgggggaggacactcacgtttcgggcggccaggcagcccgtatcgca
atcgctcgggcgctcatggttgatgccccagtgttggtgctggacgaggcgacggcgatg
gcggacccggaatcggaatcgaaaatccaacaagctctctcgactcttgccaaaggcaga
accgtgattgtgatcgcccaccgactggcctcgatcagaggggcagaccaaatcgtcgtc
atggaacgcgggcgcattgctgtggtcggtaaacacgacgagctgttgggtaatgcgcac
tatcaggcacttcttgcccaaggtgcatgcgaggagatgacacgatga
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