Varibaculum cambriense: CYK25_007940
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Entry
CYK25_007940 CDS
T09090
Name
(GenBank) phage/plasmid primase, P4 family
KO
K06919
putative DNA primase/helicase
Organism
vcb
Varibaculum cambriense
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
CYK25_007940
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Paralog
Gene cluster
GFIT
Motif
Pfam:
D5_N
DUF5906
Pox_D5
PriCT_1
Motif
Other DBs
NCBI-ProteinID:
WIK88127
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Position
1715706..1717949
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AA seq
747 aa
AA seq
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MTDFILCTTNLVSAQRNLKYPNHRHITNAADLKNTVTHDHVAAKYEGDIRSTDRFLQSTC
VVMDIDNDHSNSPADWVTPESLALIFPGVALATATSRNHLKPKGEKTARPRFHAYFPIKP
VTDAAVYTGIKKKLASYTGIFDRNALDAARFIYGNPAAEVTWADGALSITDFLDADAFAA
LEMGTGKIREGARNATMSAFAGRAIVRFGNTEQARQLFETKAQTCVPPLPDSELEAIWAS
ALKFGAKVAATPGYIPPERYAEIQGLRPTDFTDVGQATVLADEYAQKLAFSEATDWLVYN
GSFWEETRPGSRAIAQELTTRQLEQAAQLLEKAREVCDSTGVTQLLSAMSLTKAKNLFTN
VQWTAYDQLTNAQAYEKYVLKRRDSKAITASLKEAAPMLQVTQADLDADPFALNAPGGTI
DLTTGQMYEHDYGDFITKQTTTDPATKGMDTWLAALEVFFQGDQELIDYVQRIVGLTAIG
KVYVEALIIAYGDGRNGKSTFWNTIARVLGTYAGNISADALTVGVKRNVKPELAEAKGKR
LLIAAETEEGMRLSTSIAKQMASTDLLYAEKKYKAPFAFAPSHTLVLYTNHLPRVGAMDV
GIWRRLIVIPFEAKIEGSSDIKNYAEHLYQNAAGAVLQWIVDGARKVIDDDFVLKPPPKV
RRALEAYRFENDWMTHFLDDNCEIDPSFTQPSGELYSVYRAYALSVGEYARSTSDFYSAL
EQLGFRRRRTKSARYVDGLRLKSEFNL
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgactgacttcattttgtgcacgactaacctggtgagcgcgcaacgcaacctcaaatac
ccgaatcaccggcacataaccaatgcggctgatttgaagaataccgtgacacatgaccat
gtagcggccaaatatgagggcgatattcgttccaccgacaggttcttgcaatccacgtgt
gtggtgatggacatcgataacgaccattccaacagcccggctgattgggtgacaccggaa
tcgcttgctctcatcttcccgggcgtcgctttggcgaccgcgacctcgcgtaatcatttg
aaaccgaagggcgaaaagaccgccaggccgcgcttccacgcctacttcccaatcaaaccg
gtcaccgatgctgcagtctatacgggaatcaagaagaagcttgcctcctacaccggaatc
ttcgaccgcaacgctctcgatgccgccagatttatttacggaaaccccgccgccgaggtc
acctgggcagacggtgccctatccatcaccgatttcctcgatgctgacgcgttcgccgca
ctcgaaatgggcacgggcaagattcgggaaggcgcacgcaatgcgaccatgagcgctttc
gctgggcgagcgattgtgcgttttggcaatactgagcaagcacgccagcttttcgagacg
aaagcacaaacctgcgtgccacccctaccagatagtgagttggaggcgatctgggcctcg
gctctcaagtttggtgcaaaagtagctgcaacaccgggttatattccacccgaacgctac
gctgaaatccaaggactgcgtcccaccgatttcaccgatgtcggtcaagccaccgtgctg
gcagacgaatatgcgcaaaaactcgcattctctgaggcaacagattggctggtgtataac
ggctcgttttgggaagaaaccagaccaggctcgcgcgccatcgctcaagaactcaccacg
cgccagctagagcaagccgcacagctgctcgagaaagcccgtgaagtgtgtgattccact
ggggtcacacagttgctgtcggcaatgagcctgaccaaagcgaaaaacctattcactaac
gtgcagtggaccgcttacgaccagctcactaatgctcaggcctacgagaaatacgtgctc
aaacgcagggatagcaaggcgattactgcctcgttgaaggaggcagctccgatgctgcaa
gtcacccaagcagaccttgacgcagaccctttcgctctcaacgcccctggtggcaccatt
gacctcaccaccgggcaaatgtacgagcacgactatggggatttcatcaccaaacaaacc
accaccgatcccgccaccaaaggcatggacacgtggttggcggcgctcgaggtgttcttc
caaggcgaccaagaactaatcgactatgtgcagcgaatcgtggggctgaccgcaatcggc
aaagtctacgtcgaagccctcatcatcgcctacggcgacggcaggaatggcaaatcgacg
ttttggaacacaatcgctcgggtgttaggcacatacgcgggcaacatctccgccgatgct
ctcactgtgggtgtgaagcggaatgtgaagcctgagctggcagaagccaaaggcaaacgc
ctcttgatcgcggctgagaccgaggaaggcatgaggctctccacctctatcgccaagcaa
atggcatccactgatctgctttatgcagaaaagaaatataaggcgcccttcgcgttcgct
ccttcgcatacgctcgtgctatacacgaatcacctgccgcgcgtaggtgcaatggatgtt
ggtatttggcgcaggctgatcgtgatcccattcgaggcaaaaatcgaaggctcctcggac
atcaaaaactacgccgaacacctctaccaaaacgccgctggtgccgttctgcaatggatc
gttgatggtgcccgcaaagtgattgatgacgactttgttttgaagccaccacctaaagtg
cgtcgagccctggaggcctaccggtttgagaacgactggatgacacatttcttagacgat
aactgcgagatcgacccgagcttcacacagccctcgggcgagctttatagcgtctatcgc
gcctatgcgctcagcgtgggcgaatatgccagatccacgtccgatttctattcagccttg
gaacaactcggattccgcagacgccgcacaaagagcgcacgctatgtggacggactgcgc
ctgaagagcgaattcaacctttag
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