Varibaculum cambriense: CYK25_008320
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Entry
CYK25_008320 CDS
T09090
Symbol
argH
Name
(GenBank) argininosuccinate lyase
KO
K01755
argininosuccinate lyase [EC:
4.3.2.1
]
Organism
vcb
Varibaculum cambriense
Pathway
vcb00220
Arginine biosynthesis
vcb00250
Alanine, aspartate and glutamate metabolism
vcb01100
Metabolic pathways
vcb01110
Biosynthesis of secondary metabolites
vcb01230
Biosynthesis of amino acids
Module
vcb_M00844
Arginine biosynthesis, ornithine => arginine
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09100 Metabolism
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CYK25_008320 (argH)
00220 Arginine biosynthesis
CYK25_008320 (argH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcb04147
]
CYK25_008320 (argH)
Enzymes [BR:
vcb01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.2 Amidine-lyases
4.3.2.1 argininosuccinate lyase
CYK25_008320 (argH)
Exosome [BR:
vcb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CYK25_008320 (argH)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
ASL_C2
Motif
Other DBs
NCBI-ProteinID:
WIK88187
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Position
complement(1785299..1786726)
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AA seq
475 aa
AA seq
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MSEQVSLWGGRFSGGPSQALAALSVSTHFDWRLALYDLAGSRAHARALAGAGLLDAEELS
QMLAALGRLEEKVKSGAFTSDPGDEDVHTALERGLLEEAGPHLGGKLRAGRSRNDQIATL
IRMYLRNQARALAERIIEVAEALLSQAKAAGDTVMPGRTHMQHAQPVLLAHQLLAHLWPL
LRDIQRFEDWDRRVAASPYGSGALAGNTLGLDPVQVGEDLAFDRVVENSIDGTATRDVVA
EFAFICAQVGIDISSLAEEIIIWNTKEFGYVTLDDAFSTGSSIMPQKKNPDVAELARGKA
GRMIGDLTGLLTVLKGLPFAYARDLQEDKEPVFDQVDTLEVLLPAVSGMIATMTIDYGRL
EELAPQGFSLATDIAEWLVARGMPFRQAHEVSGACVRKCEENGIELADLSDEQFTAIDPL
LTPEVREVLSPAGSVQARAGRGGTAPAQVARQIDSAEEQIARIHTNFAGKHLEFK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacaggtatcgctatggggaggacgcttttccggcggcccttcccaggcttta
gcggcactttcagtatccacccacttcgattggcgcctggcgctctatgatttagccggt
tcgcgcgcccatgcccgggcgctcgcaggagccggcctgctagacgcggaagaactatca
cagatgttggcagctctggggcggctggaagaaaaagttaaaagcggtgcctttacctct
gaccccggtgacgaggacgtgcataccgccttagaaagaggactattagaggaggccgga
ccgcatttaggagggaaactgcgtgctggacgtagccgtaacgaccagattgccaccctc
atccggatgtatctgcgaaaccaggcacgcgccctagctgagagaattattgaggtcgca
gaagctcttttgagccaggctaaagccgccggggatacagtcatgcccgggcgcacccat
atgcagcatgcccagccggtattgcttgctcaccagctcttggctcacctgtggccgctg
ctgcgggatatccagcgttttgaggattgggatcggcgcgtcgccgccagtccctacgga
tccggggcgctcgcgggcaacaccctggggctagacccggtacaagtgggggaagatctg
gcctttgaccgagtagtagaaaactccatagacggaaccgccacccgtgatgtggtggcc
gagtttgcgttcatctgcgcccaggtcgggattgatatttcctcccttgcggaagaaatc
attatttggaataccaaagagttcgggtacgtcaccttggatgatgcgttctccacagga
tcatcgattatgccgcaaaagaagaatccggatgtggcagaattggcgcgaggtaaagcc
ggtcgcatgattggggatttaaccggcctgctgacagtcctcaaagggctccccttcgcc
tatgcacgtgacctgcaagaagacaaagaaccagtttttgaccaggtcgacactttagag
gttttgctgccggctgtaagcggcatgatagccactatgacgattgactacggccgtcta
gaagaactcgcgccccaagggttttcgttggccaccgatattgccgagtggctagtggcg
cggggtatgcccttccggcaggcacatgaagtatccggggcttgcgtacgcaaatgcgaa
gagaacgggatagagctggcggatttgagtgacgaacagttcaccgctatcgacccgctg
ctaactcccgaagtgcgggaagtgctcagccccgccggttccgtgcaggctcgtgccggc
cgcggagggacggcgcccgcgcaggtcgcgcggcagatcgattccgccgaagagcagatc
gcgcgcatccacaccaatttcgccggcaaacatctggaattcaaatag
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