Varibaculum cambriense: CYK25_008530
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Entry
CYK25_008530 CDS
T09090
Symbol
pheT
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
vcb
Varibaculum cambriense
Pathway
vcb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CYK25_008530 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vcb01007
]
CYK25_008530 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcb03016
]
CYK25_008530 (pheT)
Enzymes [BR:
vcb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
CYK25_008530 (pheT)
Amino acid related enzymes [BR:
vcb01007
]
Aminoacyl-tRNA synthetase
Class II (U)
CYK25_008530 (pheT)
Transfer RNA biogenesis [BR:
vcb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CYK25_008530 (pheT)
Prokaryotic type
CYK25_008530 (pheT)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
WIK88220
LinkDB
All DBs
Position
complement(1830578..1833226)
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AA seq
882 aa
AA seq
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MPFVALDWLKDHVEVVPGTDIKQLSTDLVKVGLEEEAIHPAAVIGPLVAGRVLTLDAKEQ
SNGKVINYCRVDVGKFNDRPGEGKEPSELPSRGIICGAHNFKVGDLVVVSLPGAVLPGDF
QIAARKTYGHVSDGMICSQRELGIGDDHDGIIVLEQLLPEKAAAGELPAPGESVIELLGL
GEETLEINITPDRGYCFAMRGVGREYAHSTGAKFTDLGLAENLPSGSVPAATADGFTVKV
ADEAPINGKVGCDRFVTRIVTGIDAQAATPDWMVRRLEQAGMRSISLAVDATNYVMLDLG
QPLHAYDLDKVCGPIVVRRAKAGEKLTTLDEVERTLDPEDLLITDSPQGAEGSRVLGLAG
VMGGASTEVTADTVNVLVEAAHFHPTSIARTARRHKLPSEASKRFERGVDFEVAPVAAQR
VVDILVEYGGGTDSGRVSDLNNTEPFAEIVMPLHEPARLTGVEYDQETLTRLLKDVGCKV
QVADGNVIAQPPSWRPDLTGPAHLVEEIARLAGYDTIPSRRPRPIAGRGYTPKQRARRDV
GRALAQGGLVQVLSYPFISEEVFDAELLGEKDVRRQAVRVANPLADDQPLLRTSLLDTLL
GVARRNIARGNEQCAIFETGLVTRGMGTELTGSFGVEQKPDPDQQRALEKGVPYQPEHLA
GVLVGQAELAGSLSAGRAYDWADAVEFVRTVAQTLAVPMRVQGKDGRQRLANDNMMGELG
SSAAVAPFHPGRCARIVVRGACVGLAGQLHPAVCRNFGLPESACAFEIDFEKFTEAMPKK
DLQVKPVSSFPPAKEDIALVVDADIPAADVQQVIEKQAGDLLEEVRLFDVFSGEQLGAGK
KSLAFSVKIRSGEGTLSASEIQAVRTRIIKATAKKFKATLRA
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgccatttgtagcgcttgattggctaaaagatcacgttgaggtagtgccaggcacagat
atcaaacagctttcaactgacctggtaaaggtaggtttggaagaagaagccatccatccg
gccgcggtaatcggccccttggtggccggaagggtattgaccctggatgccaaagaacaa
tccaatgggaaagtcatcaactattgccgagtagatgtgggcaagtttaatgaccgtccc
ggggaaggtaaagagccctctgagctgcccagtcggggaattatttgcggtgcccacaac
tttaaagtgggagatttagtggtggtgtcgctgccgggcgcagttttgcccggtgatttc
cagattgctgcccgtaaaacctatggacacgtttctgacgggatgatttgctcccagcgg
gaactggggattggcgatgaccatgacggaattatcgtcctggagcagttactgcccgaa
aaagcggcagccggggagctgcccgcgcctggcgaatcggtaattgaacttctgggatta
ggggaagaaacactagaaatcaatatcacccctgatcgcggatactgtttcgcaatgcgc
ggggtgggacgcgaatacgcccactccaccggggctaagttcactgacttggggctggca
gaaaatctgccttccgggtcagtaccggcggcaaccgcggacggattcacggttaaagtc
gcagatgaggctccgattaatggcaaagttgggtgtgaccgttttgtcacccgcattgtg
actggcattgatgcgcaggcggcgactcccgactggatggtgcgccgcctagagcaggca
ggaatgcgttctatttctttggcggtagatgccaccaactatgtgatgctggatttgggg
cagcccctgcacgcctatgacctggataaagtgtgcgggccgatcgtggttcgccgggcg
aaagccggcgaaaagctaactaccctcgatgaggtagagcgcaccctggatcccgaagat
ttactgattaccgactccccgcagggagcagaaggttcccgcgtgctcggcttggcagga
gtaatgggaggcgcctccaccgaggtgactgccgatacggtgaatgtgctggtagaggcg
gcacatttccaccccacttcgattgcgcgtactgcgcggcggcataagctgccctccgaa
gcctccaaacgtttcgaacgcggcgtggacttcgaggtggcgccggtagctgcccaacgt
gtagtagatattctggtggaatacggcgggggcaccgacagtgggcgggtcagcgacctc
aataacaccgagcccttcgcggaaatcgtgatgccgctgcatgaaccggcacggctaacc
ggagtggagtacgatcaggaaacccttacccgcctgctaaaagacgtgggatgtaaagtg
caggtagcagacggcaatgtcattgcccagccgccttcttggcgtcccgatctgaccgga
ccggcgcacctggtagaagaaattgctcggctggccggctatgacactattccttcgcgg
cggccgcgcccgattgcgggacgcggatacacccccaagcagcgggctcgccgcgatgtg
gggcgggcgctggcgcaaggcggcctggtgcaggtgctctcctaccccttcatatccgag
gaagtatttgacgctgaactgctaggggaaaaggatgtgcgccgccaagcggtgcgggtg
gccaacccgctggcggatgatcaaccgttgctgcgcacttccttgctagataccttgcta
ggagtagcccggcgcaatatcgcgcgtggcaatgagcaatgcgcgattttcgagaccggt
ttggttacccgaggaatgggaactgaactaactggttctttcggagtggaacaaaaacca
gatcctgaccagcagcgcgccctcgaaaaaggagttccttaccagcctgaacatctcgcc
ggcgtcctcgtgggacaggccgaattggctggttcattgagtgcaggtcgcgcttatgat
tgggcggacgcggtggagttcgtgcgcacggtggcgcaaactttggcggtaccgatgcgc
gtacaaggcaaagatgggcgtcagcgcctagctaacgataacatgatgggcgagctgggc
tcgtcggcggcagtcgcgcccttccatccgggacggtgcgcgcggatcgtggtacgggga
gcctgcgttggtttggccgggcagctccacccggcggtttgccgcaacttcgggttgccg
gaatcagcttgcgctttcgagattgacttcgagaagttcaccgaagcgatgccgaagaaa
gatttgcaggtgaagccggtttcatcctttccgcccgcgaaagaagatatcgcgctggta
gtcgatgcggatattcccgcagctgatgtgcaacaggtgattgagaaacaggcgggagac
ctgctggaagaagtacgtctcttcgatgttttcagtggtgaacagttaggcgcgggtaag
aagtcgctggcgttctcggtgaagattcgctctggggaaggcacgcttagcgccagcgag
attcaggcggtgcgcacccggatcattaaggctaccgcgaagaagttcaaggcgactttg
cgcgcctag
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