Varibaculum cambriense: CYK25_008925
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Entry
CYK25_008925 CDS
T09090
Name
(GenBank) VaFE repeat-containing surface-anchored protein
Organism
vcb
Varibaculum cambriense
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Ortholog
Paralog
GFIT
Motif
Pfam:
TQ
Motif
Other DBs
NCBI-ProteinID:
WIK88294
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Position
complement(1894853..1897702)
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AA seq
949 aa
AA seq
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MIQKVSKRLVLLAALVALALSVLVPLSAPKAESKKTGPGYFITARTGAAPKHWLGAHIDP
QNPGKLVWCIELGPYAIGPGMTVSVETLDDAKGMTNYGGNDVNLDSIAQIAYLLNKYEKV
NTADSRAALSMIMHFNLELNKASAKDEMYYVWSTLQSKYPGAAKLTRQYVAEARNSGVAG
YQSVSHTGDNKTTGNVRNIGVKNSAGKLIAGVPFTAKLNGPAVFTSTGKNTYSGKTAAKP
ITLDWRATGNGKVAGSIDFNHAHTAHRLTGPKGLQRMIRGADPSVKNVPGGTWQVIYDFQ
PIATSKVEKPVVETGETTITDTLEAKADPKYANPNWLKDVKVKYEADVYYMGETLPTKGM
KIPAGAKPVATTSLTFDAPGTQKATVNVDKPGFYTWVWKVVKKNQAAPDRIHADWTDGYA
LPDEFQSEKKTAKITSAKNIINVHADSDAKTFINDWVKVADFPTNHTDFKGYGGVKADLG
TIDQHLYCVPDKTKLAEGVTRSLKPVKSWTIPAKNGDYRIADYFPDAPGEHIQDIDCRGT
LVFVSEFAGDDRVEPLRTSDMDPKESFRPDHPTIHTMATDKADGDKYLPIKGNVTITDKV
KYTELAAGKEYTLKATLMDKATGKPFQDCGEVKANDYSKAIASQLDSFEAKLKKDSKASF
DVKTALSGILPKVSEADLDKAIATLDKDKVAGLVKDGKFDYDEAGKVLSKLTLALDKPAE
GKDCKPVTAEKKFTPKHRNGVVEIDIPVRAELLKGKTTVVFEDVLREGKEPIVHHDINDR
DQTVYSPDAKTTATDGKDGDKTVLDGRVHINDTVEYHSLKPGETYTLVGTMMDKATGKKV
DCMGAKPVTFKADKSGNGKVNMAFYGNCSVAANSKWVVFEDIYTGKNPKGTHVVEHHDLD
DIDQTVTVIKSGGAGLAVTGSTGLVALGASLMLVIAGGAVALYRRKMTM
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgatacaaaaagtatcaaaacgcttagtattgctagctgccttggtggcgttagcactg
agcgttcttgttccactatcagcgcccaaggctgagtcgaaaaaaacagggcctgggtat
tttataaccgccagaacgggcgctgcccctaaacactggctcggagcacatattgacccc
caaaatccgggcaagctagtttggtgtattgagctaggaccctatgcgattggtccgggg
atgacggtatctgtcgaaactttagacgatgctaaaggcatgactaactacggtggcaat
gacgttaacttagattctattgcccagattgcctacctgttaaacaaatacgagaaggtt
aatacggctgattctcgggcggctttatctatgattatgcactttaacctggagctaaat
aaggcatcagctaaggacgaaatgtattacgtttggagtactttgcagtccaagtaccct
ggggctgcaaaactcacgcgccaatacgttgccgaagcccgcaattctggggtggcaggt
tatcaaagcgtaagccataccggggataacaagactaccggtaatgttcgtaatattggc
gttaagaactcggcaggcaagttgatcgccggggtgccatttactgcgaagctaaatggt
ccggcagtatttacctctactggtaagaatacttactcgggtaagaccgccgctaagccg
attactttggattggcgcgcaaccggcaacgggaaggtggctggaagtattgactttaac
catgcgcacaccgctcacaggctgaccgggccgaaggggcttcagcgcatgatacgagga
gctgacccctcggtgaaaaacgttcccggcggcacttggcaggtaatctatgatttccag
ccgatcgctacctctaaggtggaaaagccggtagtagaaactggggaaaccactattacc
gataccctggaagctaaggctgacccgaagtatgctaacccgaactggttaaaagacgta
aaggtcaaatacgaggccgacgtttactacatgggagaaaccctgcctactaagggcatg
aagatccctgccggggcaaagccggtagctactacttcgctaacctttgacgcaccgggc
actcagaaagctacggtaaacgttgataagccgggattctacacttgggtatggaaagta
gttaagaagaaccaagccgcccccgaccgtatccacgcggattggacggacggttacgct
ttgcctgatgagttccagtcggagaagaagaccgctaagattactagcgcgaagaacatc
attaatgttcacgctgattcggacgctaaaaccttcattaacgactgggtaaaggttgct
gacttcccgactaaccataccgactttaagggatacggcggagttaaggccgacctgggc
actatcgaccagcacctgtactgcgtgccggacaaaaccaagctggctgaaggcgtaacc
cgctccttgaagccggttaagtcttggactatcccggccaagaacggtgattaccggatt
gctgactacttcccagacgctcctggcgaacatatccaagatattgactgtagagggact
ttggttttcgtgtccgagtttgcaggagatgaccgggttgagccgctgcggacctccgat
atggacccgaaagagtctttccggcctgatcacccgaccattcacacgatggccaccgat
aaggctgacggggacaaatacctaccgatcaagggcaacgtgaccattaccgacaaggtt
aagtacaccgagctggctgccggtaaggaatacaccctgaaagcaacgctcatggataaa
gctaccggtaagcctttccaggactgcggcgaagtaaaggcaaacgactattccaaggcg
attgctagccagttggactccttcgaggccaagctgaagaaagactcgaaagctagtttt
gatgtaaagaccgcactaagtggtattttgcccaaagttagcgaagcagacctagacaag
gcgattgctaccttggacaaagacaaagtggcgggcctggttaaggacggcaagttcgac
tatgacgaagccggaaaagtcctatccaagctgaccctcgccctggacaagcctgccgag
ggcaaggactgcaagccggtaactgccgagaagaagttcactcctaagcaccgtaatggg
gtagtggagattgacattccggtacgcgccgaactgctaaagggtaaaaccaccgtggtc
tttgaggacgttttgcgtgaaggtaaagaacctatcgtgcatcacgacatcaatgatcgt
gaccagaccgtgtattccccggacgctaaaaccactgccacggatggcaaagatggggac
aagaccgtgctggatgggcgggtacatatcaacgacaccgttgagtaccactccttgaag
ccgggcgaaacctacaccctagtgggcaccatgatggacaaggctactggcaagaaggtt
gactgcatgggcgcgaagcctgtcaccttcaaagccgataagtccggcaacggaaaagtt
aatatggctttctacggcaactgctccgttgctgccaactccaagtgggtagtgttcgag
gacatttacactggtaaaaacccgaagggcactcacgttgttgagcatcacgacttggat
gacattgaccagacggttaccgtcatcaagtctggtggggcagggctagccgtaactggc
tcgactggcctagtcgccttgggtgcgtctttgatgctcgttatcgcgggcggagcggta
gctctgtaccggcgaaaaatgaccatgtaa
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