Varibaculum cambriense: CYK25_009050
Help
Entry
CYK25_009050 CDS
T09090
Name
(GenBank) RNA-guided endonuclease TnpB family protein
KO
K07496
putative transposase
Organism
vcb
Varibaculum cambriense
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
CYK25_009050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
Zn_ribbon_IS1595
C1_1
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
WIK88318
LinkDB
All DBs
Position
1915183..1916325
Genome browser
AA seq
380 aa
AA seq
DB search
MGKGFEYRLYPSREQMRLLARFFGCVRWVYNFFLRLCIDTYEKTGKSPSIYECMRMVTEL
RKAEDTAWLAEADSTALQQSLRDLGKAFGNFYKRRNQGVGFPRFKKKMARKSYRTTKVRI
VDDSHVYIPKIGVVKARISRPIQGRIVSATIKQVPSGKYFIVFTCTDVPEAPKAKTGKAV
GIDLGIASLVTTSDGQKIGGTEGARKLERKLAKEQRKLSRKKKGSNNRAKQKIRVARAYE
KIANKRKDHLHKVTAKIIDENQVICAETLNVDGMLKNHHLAKSIAMQSFATILGFLEYKA
REKGKIFVQVDRWFASSKTCNSCGVKADAMPLGIRSWQCKSCGATHDRDINAAKNILTEG
MKVLEGTEGHSGAAAITIAA
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaggatttgagtatcgcctatacccgagccgggagcagatgcggttgctggct
cggtttttcgggtgcgtaagatgggtgtacaactttttcctgcgcttgtgtatagataca
tacgagaaaacaggcaaaagccccagtatctatgagtgtatgaggatggttaccgagctt
agaaaagctgaggatacggcttggctggctgaggctgattctacggccttgcaacaatcc
ttgcgggacctaggcaaggcctttgggaacttttacaaaagaaggaaccagggcgtaggt
tttcctaggtttaagaagaagatggctcgtaagtcttatcggacaaccaaagttagaatc
gttgatgacagccatgtgtatattccaaagataggcgtggttaaagccaggattagtagg
cctatccagggcaggattgtttctgccacgattaaacaagtaccgagcggtaaatacttc
attgtgttcacctgtactgatgttccagaagcaccaaaagccaagaccggcaaggctgtt
gggatagacctcgggattgcgagcctggttactacatccgatggccaaaagatcgggggc
acagaaggcgctcgtaagctagagagaaaacttgcgaaagagcagcggaaactgtcgagg
aagaagaaaggatcaaataatcgagcaaaacagaaaatcagggtagcgcgggcatacgag
aaaatagcgaacaaaagaaaagaccatctgcataaggttacggcgaagattatcgacgag
aaccaagtgatatgtgccgaaaccttaaacgtggatggaatgcttaagaatcatcacctt
gcaaaaagtatcgcaatgcaaagtttcgccaccatcctaggctttctcgaatacaaagcc
agggaaaaaggcaaaatctttgttcaggtggatagatggtttgcatcctcgaaaacctgt
aatagttgcggggtaaaggcagatgcaatgccgctgggtatacgatcctggcaatgcaaa
tcctgcggggcaacccatgatcgggatattaacgccgccaagaacattctgacagaggga
atgaaagttttagaaggtaccgagggacactcgggggccgcagcaataactattgctgca
tag
DBGET
integrated database retrieval system
