Varibaculum cambriense: CYK25_009070
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Entry
CYK25_009070 CDS
T09090
Name
(GenBank) peptidoglycan DD-metalloendopeptidase family protein
Organism
vcb
Varibaculum cambriense
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M23
NLPC_P60
Motif
Other DBs
NCBI-ProteinID:
WIK88322
LinkDB
All DBs
Position
complement(1918201..1921737)
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AA seq
1178 aa
AA seq
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MANQSKLPPLPKPKTGAGRAPGAMPKPKSSASKAGGTKSKLGKIAPNVPGRKKSSSLSNL
PRPNEEERKEKRQQDRQKRDKRATRSVKAASLAANIAAPGSGKIVKAVGNNPVAKKLISA
SIKVKMVIGALVAAALVLVIVIPGFAIATFTSGLSLPQKMALDTASTIAKQDMAAKAEEI
DILGSDTQDFSAMPIAASAAMMDNPMQDGNGGASDANLPEGDAGSVIEVAKHWIGVPYVW
GGTTPKGWDCSGFTMGVYRTALGIVLPHASGAQGSKGKEVSLSEAKPGDLVTYPGHVMIF
LGKADGGSIYIIHSPKPGGKVTIAKRSASGCKFFRMFNNTASADYIPSESELTKNSGAGL
PTYQLNAFDNWAISNGYFTQTSSKAYPKESVSGTAPSGASKASFKGYIEVKPAVAHFATS
LIPFSPSPSPSEPESESESPSPSESDSAADTSNALSASDGTGQILGTGVGPMHIKEGVLD
EDKAKSLSTSNRFLSCVVDKIAGTGTDPFRFAAGWKKSDRDRKIVDQTEYDKAKKTGSKI
MQMLPLDGIDESKAGQLFDKASKWYNGKKVSEACEEDEVVDHTEQEQAGNGGQTTPTDGE
AIKVTGPDGKEKTLSGEEYAFVSEVASKVNTPDFGVDQRVGAIEWAILHTNAKDKVDGAL
EKIKSDWDDGKSIGENVYKAAGDLSAADYDGQEAPARQLAGSGATTLTKCGTVGGPGCAG
GKFNKDQPLDDSAVYGEPGMSQEQIQAFLDKKGSWLAKNKVDTNTKAPDQFCKGYESSGQ
ELPSEIIYKTAKSCDVKAQWIMTRLQAEQSLITKKTEGNLRSAMGYGCPDGKACAAEYYG
FFNQVWWGSRQVQNYKKGSYKDSMPIGQQQTDLEGIPYTPKNNAARVLYLYTPHTSAANS
TFDIYKDYFPCSGVDEAKDKSNGGAQNTAFKGYFEATPAIGHKSPDGGFKARPVDNEYGW
DGKFSKPYTGPNPRVTSPYGYRIHPVTGQRKKHNGVDLGLAEGVPQYAAAPGVVEFAKPY
STCGNAVKIKHGEFKGHQWATMYCHLSGMNVTAGQKVQAGTKIGITGHTGRVTGAHMHFE
VQQDGVAIEPTQFIFDGKEATPQEGMSNDGGSADGSNDGGLSSEEVKKAHDAWVACGGRV
PVSSDSSPSLEPIPGTQEATVPDPTTKNGKITPRMKKF
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggctaaccagtcgaaacttcctcctttacctaagccgaagacgggggcgggtagggct
ccaggcgctatgccgaagccaaaatcttctgccagcaaagcgggtggcaccaaatctaag
ctaggcaaaattgcgccaaatgttccggggcgtaaaaaatcttctagcctttctaacctg
ccgagacccaatgaagaagaacgcaaagaaaaacgtcagcaggataggcaaaaaagggac
aagcgggctacccgtagcgtaaaagccgcatctctggccgctaatattgcagctcctggc
tcaggcaagatcgttaaggcagttggtaataatccagttgctaagaagctgatctctgcc
agtattaaggtcaagatggttatcggtgcgctggtagctgccgccttagtgctggtgatt
gttattcccggttttgcgattgctacttttacttcggggctgtctttgccgcaaaaaatg
gctcttgatactgcttctaccattgccaagcaggatatggcagctaaggccgaggagata
gatattctaggctcggatactcaagacttttctgccatgccgattgcggcatctgccgcc
atgatggataaccctatgcaagacggtaacgggggcgcatcggacgcgaatctgccggaa
ggggacgcgggctcggttatcgaggtcgctaaacactggatcggggttccctatgtttgg
ggcgggactacacctaaaggttgggactgttccgggttcacgatgggggtttaccgtact
gctctaggaatagtactacctcacgctagtggggcacaggggagtaaaggcaaagaggtg
tctttgtctgaagccaagccaggtgatttggttacttatccagggcacgtaatgattttc
cttggcaaagctgatgggggatcgatttacattatccactctccaaagcccggaggaaaa
gtaaccatcgctaagcgatccgcttcagggtgtaagtttttccggatgtttaataacacg
gcgagtgccgactatatcccttctgaatctgagctgactaagaactcgggtgccggattg
cccacctatcagctaaatgcttttgataattgggcaatatctaacgggtattttactcaa
acttcttccaaggcctacccgaaagaatccgtttccgggacggcacctagcggggctagc
aaggcttcctttaaaggatacattgaggttaaaccggcggttgctcattttgcgacctcg
cttattccatttagtccgtctcctagcccgagcgagcctgaaagcgaatctgaaagcccg
agccctagtgaatctgatagcgcggcggatacctctaacgcgctttctgcttctgatggt
acggggcagattcttgggacgggcgtaggccccatgcacatcaaggaaggcgtgctagat
gaagataaagctaagtccctttctacttctaaccggttcctatcttgcgtagtagataaa
atcgcggggaccggcaccgacccgttccgttttgctgccgggtggaagaagtcggacagg
gatcgcaagatcgttgaccaaaccgagtatgataaggccaagaaaaccggctctaagatc
atgcaaatgttgccgctagatgggatagacgaatctaaagctgggcaattgttcgataaa
gcctccaagtggtacaacggcaaaaaagtctctgaggcttgcgaagaagacgaagtggta
gaccataccgagcaagaacaagcgggtaacggcggtcaaaccacgcctaccgatggggaa
gctattaaggtcactggcccagacggtaaggaaaagaccttatcgggagaagaatatgct
tttgtctccgaggtggctagcaaagttaacacccctgattttggggtagatcagcgagtt
ggcgctatcgaatgggcgattttgcatacgaacgctaaagataaagtggatggggcccta
gaaaagatcaagtccgactgggatgatggtaagtccattggcgagaacgtctataaggct
gctggtgacttgtccgctgctgactatgacggccaggaagcgcctgctcgccagcttgca
ggtagcggggctactactcttactaaatgcggcactgtgggtggtccgggttgtgctggc
ggaaagtttaataaagatcagccactcgatgacagcgcggtttatggcgaacccggcatg
agccaagaacaaatccaggcgttcttagataagaaggggtcttggctggctaagaataag
gttgacacaaacactaaggcaccggaccagttctgcaaagggtacgagtcttctggccag
gagctgccgagcgagattatatataagactgctaagtcgtgtgacgtaaaagcgcaatgg
attatgacgcgcctacaagcagaacaaagccttattacaaagaaaactgagggcaatctt
cgctctgctatggggtatggatgcccggacgggaaggcttgtgccgcagaatactacggc
ttctttaaccaggtgtggtggggcagccgccaggtgcaaaactacaagaagggaagctac
aaggactcaatgcccataggtcagcaacaaacagatttagagggtattccttataccccg
aagaataatgctgcccgcgttctatatctatataccccgcacacctcggcggcgaattcc
acttttgatatttacaaagattacttcccctgttcaggcgtggacgaggctaaggataaa
agtaatggcggggctcaaaataccgcctttaaggggtactttgaggccacccccgcaata
ggtcataagtctccggatgggggctttaaagctagaccggttgataatgaatatggctgg
gatggtaagttctctaagccttatactgggccgaatcctagggtgacctctccttatggg
tatcggatacacccggtaactgggcagcgtaagaaacataatggggtggacttagggctt
gcagaaggtgtacctcagtatgcggctgcacccggcgtggttgagttcgccaagccttat
agcacttgcggtaacgcggtgaagatcaagcatggtgagttcaaaggccatcaatgggct
actatgtactgtcacctgtccggcatgaatgttacagcaggtcagaaggttcaggcgggc
actaagattggtataaccggtcatactggtagagtcacgggcgctcatatgcacttcgag
gtccagcaagacggggtagcaatcgagccaacacagttcatctttgacggtaaagaagca
actccgcaagaaggcatgagcaatgacggaggtagcgcggacggttcaaacgatgggggc
ttaagcagcgaggaagtaaagaaagctcacgacgcgtgggtagcgtgcggcggcagggtg
ccggtatctagtgatagctccccctctctagagccgattccaggtacgcaggaggctact
gtaccggatccgactactaagaatgggaagattactccccggatgaagaaattctga
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