Varibaculum cambriense: CYK25_010565
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Entry
CYK25_010565 CDS
T09090
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vcb
Varibaculum cambriense
Pathway
vcb02020
Two-component system
vcb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CYK25_010565
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CYK25_010565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcb03000
]
CYK25_010565
Transcription factors [BR:
vcb03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
CYK25_010565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
MarR_2
HTH_24
Crp
GntR
Sigma70_r4
HTH_3
YfeC-like
HTH_PafC
DUF1670
TetR
Motif
Other DBs
NCBI-ProteinID:
WIK89646
LinkDB
All DBs
Position
complement(2220964..2221647)
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AA seq
227 aa
AA seq
DB search
MSLDSSFLARVPLFEGLDQEAQMRLFSMMGQTTLRRGENLFEEGDDGDRLYIVAEGKIKL
SHQSLDGRENLLAVLRTGEILGELTLFDPGQRSTTATAVSPARLVFLNHSDLMVFLEDNP
SLAKHMLKALAKRLRRTNEALADLVFSDVPGRVAKALLDLADRFGIRTEDGIHVPHDLTQ
EELAQLVGASRETVNKSLAEFVNRNWIRLEGRAVTLIDIDRLARRAR
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
attagcttggattcgtcctttttagctagagtccctctctttgagggactcgatcaggaa
gcgcagatgcgcctgttctcaatgatggggcaaaccaccttgcgccgaggggaaaaccta
tttgaagagggcgatgatggcgaccgcttgtatatcgtggccgagggcaaaataaaacta
tcgcatcagtccctggatggtcgcgaaaacctgctggcggtgttacggaccggggaaatc
ctgggcgagctaaccctgtttgatcccgggcagcgttctactactgctaccgcggtttct
ccggcccgattggtgttcttaaaccacagcgacttgatggttttcctggaggacaacccc
tccttggcgaaacatatgctcaaagcgctggcaaagcgcctgcgccgcaccaatgaggct
ctagctgacctggtgttctcggatgtgcccggcagggtagccaaggcgcttctggatctg
gcagaccgtttcgggattcgcaccgaggacgggattcacgtaccccacgacctcactcaa
gaagagttagctcagctggtgggggcatcgcgggaaaccgtgaacaagtccttggccgag
ttcgtgaaccgcaactggattcgcctcgagggacgagcagttaccttgattgatattgat
cgtttggcgcggcgtgctcgctaa
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