Varibaculum cambriense: CYK25_010680
Help
Entry
CYK25_010680 CDS
T09090
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
vcb
Varibaculum cambriense
Pathway
vcb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CYK25_010680
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcb02000
]
CYK25_010680
Transporters [BR:
vcb02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
CYK25_010680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_29
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WIK88599
LinkDB
All DBs
Position
complement(2244868..2246601)
Genome browser
AA seq
577 aa
AA seq
DB search
MFAKQRLVMRAAGVSVWLLAPAMMLGVLVSCLYIATAVCNAMLFNELLSSRRVSTVVGLI
IAIAGLLLIRPLLEVSGQLLQNRAGLVVKSRLRQALLEQLDARGPMRGGLGRSGQIQSVL
TDGVEAIEPYFVKYFTQLAVTALTAIGLTIAIASISPLIAGVLLVCGVAIIAIPRLWDRA
LADRGQSHWVAYENLNADFVDSMMGMSTLKSFGAAKDHGTQLEKQSSQLLKTTMGQLRLS
LGETGLSGMMKVLGPALGLVIAISLITSKSMPISSLFVVTLLAIELFRPFTALSACWHEA
FFGISALPAMSELFEQEQTSATTRKSPQNMPRSNEVSFVDISYTYPGAAEPALEQVTFVA
PAGKTTALVGLSGSGKSTALGLLMGFDHPDSGSITVGGVSADSLEIARTVTLVPQDPIIF
PGTVRSILAEANPKADEAEMMTALKLACATNLHPDNNPDSGDNILDLEIEEHAQNLSGGQ
KQRLAIARALVRKCPLLVLDESTSGLDTQTETTVLTNIRKAYPNLTLLLVTHRIDAAEQT
DHVVVMGHGKVLCSGNPCTLSQEDNAWSRLISAQIGA
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgcaaagcagcgtttagttatgcgcgccgccggagtctccgtgtggctgctggcc
cccgccatgatgttgggtgtcctggtgtcttgcttatatattgcaaccgcggtgtgcaac
gccatgcttttcaatgagctattgagctctcgccgggtctccacggtggtgggactaatc
atagctattgccggtttgctcttaatccgtccgttacttgaggtcagtggacagcttcta
caaaatcgagcgggactagtggtgaaaagccgcttacggcaggcgcttctagagcaacta
gatgcgcgcggacctatgcggggaggactggggcgttctggacaaatacagtcggttctc
actgatggggttgaggcgatcgaaccctatttcgtcaagtatttcacccaactggcggtc
actgctctaaccgcgattggtttaacaattgctattgccagcatttctcccctgattgcg
ggagttcttttagtctgtggagtcgcgattattgctattccccgattatgggatagagct
cttgctgatcgcggacaatcgcattgggtagcgtacgaaaatctcaatgccgatttcgtg
gattctatgatgggaatgtccactttgaagtcttttggggcggctaaagatcatggcacc
caattagaaaaacagtccagccagctgctcaaaactactatggggcagctacggctttca
ttgggagaaactggcctatcaggaatgatgaaagtgctcggtcctgctctcgggctcgtg
atcgcaatttctttgattacttccaagtcgatgccgattagctcgctatttgtggttacg
ctgctagctatcgaacttttccgcccgtttactgccttatcggcatgttggcatgaagcg
tttttcggtatttccgcgctgccagctatgagcgagttatttgaacaggagcaaacttct
gccactacccgcaaatctccgcaaaacatgcctcgcagtaacgaagtatctttcgtggat
atctcctacacttatccgggagctgccgagccggctcttgagcaagtcactttcgttgca
cctgcaggtaaaacaaccgctttggtggggctgtcaggttccggaaaatccactgcgctc
gggttattaatgggtttcgatcaccctgatagtggaagtatcacagtgggaggggtttca
gcggatagtttggagattgcgcgtaccgtcaccctggttccgcaagacccgattattttt
ccaggaacagtaaggtcaattttggccgaagctaatcccaaggcggatgaagcagagatg
atgacggctctcaagctagcctgtgctacaaacctgcatcccgataacaatcctgattct
ggtgacaatattcttgatttagaaattgaagaacatgctcagaacctttcgggaggacaa
aaacagcgactggcgattgctcgggctctggttcgcaaatgcccgctcctcgtactcgat
gaatctacttctggtctggacacccaaacagaaacaacggttctgacgaatattcgcaaa
gcgtacccgaatctcactttattgctggttacccaccgtattgacgctgctgagcaaaca
gatcatgtagtggtaatgggacatgggaaagtgctttgtagcgggaatccctgtacgtta
agccaggaagataatgcctggtcaagattgattagtgcacagataggagcctag
DBGET
integrated database retrieval system
