Varibaculum cambriense: CYK25_010685
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Entry
CYK25_010685 CDS
T09090
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
vcb
Varibaculum cambriense
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcb03009
]
CYK25_010685
Ribosome biogenesis [BR:
vcb03009
]
Prokaryotic type
ribosomal protein modification factors
CYK25_010685
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
WIK88600
LinkDB
All DBs
Position
complement(2246636..2248606)
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AA seq
656 aa
AA seq
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MADAEVIVCGDPTIARLITSELQKIDVTARLSSQSVRECAYQVFNRGALVVCRGDDPAPV
FAQTIEDNLGLNISVITVDHTPDQLLVGPAVLKGQGATYSDSLARLAGNAVNSAVFQAKM
GSPVWGSFLPRLGAATNMGHKAAELIKAITRNEIDNQKSTPLDTIWAISMDGELEVHAVL
PTNFMMGPQPKSPIHPPTFVVDKCYGIVKELTRVHHSAYMPPTLHTTQARTCDLRRTSTY
INTVFCQGSTLIPNEVGEAEKEAQIHDTELAAIGESVERYCSNLIDLKPILHGSYRELTR
KGYPLLHPEELVLFSANQYQHPGFPFVPLTPDLPVGWVEGTYYEDEEPVFVPASLVYVNW
YTNQYRQEPKVNFPAFAGVAAGTSSDQAILSGISEIIERHATMVWWLNAQPLPHLELPQK
YLDLFSGTKEPLRPALINLDNTFNIPVLAGVVHNDVSKLVHVGFSCRSSVEQGALKAWSE
ALTLQEGAHDLANPEGAHWTAIRKGLLPGRSYKKWRRDRRYLDDFREDLKDVDDLLIQQE
VFLDPRAVDRVKPLLDIPATRSISSVPQLKDSQLASYIERIHARGMRVITVDITSRDVAS
CGLHVIRTLIPGTIGNTPAAFPYLGRNMVAEEAVRLGWVDSPRPEGSMNPFPMPHA
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgcagaggtaattgtctgcggcgatcccacaattgcgcgtttaataacttca
gagctccaaaagattgatgtcacggcgcgcctgtcttcccagtcagttcgcgaatgtgca
taccaagtcttcaatcgcggcgccctggtggtgtgtcgcggagatgatcctgctcccgta
tttgcgcaaactattgaagacaatctcggactaaatatttcagtgatcacggtggatcac
acccccgaccaactattggttggcccagcagtacttaaagggcaaggtgcaacttatagc
gacagtcttgctcgtctcgccggaaatgcagtcaatagtgcagtatttcaggcaaaaatg
ggtagccccgtatggggaagtttcttaccgcgcttaggtgcagccacaaatatggggcac
aaagcagcggaattaattaaagctattactcgcaatgaaatcgataaccagaaatcaacc
ccccttgacactatttgggcaatttccatggacggggagctcgaagttcacgcggtgctt
cccacgaattttatgatgggccctcagcctaaatccccgattcaccctcccacctttgtg
gttgataaatgctatggaatcgtaaaagagctcactcgggtacatcacagtgcctatatg
ccgcctacgttgcatactacccaggcgcgaacgtgtgatttacgcagaacatcaacttat
atcaacactgtattttgccaaggctcaacgttaatccccaatgaggttggagaagcagaa
aaagaagcgcagatccacgacactgaactagcggctattggtgaatcggtcgagcgttat
tgctctaacctaatcgatctcaaaccgatattacatggttcttatcgggaattaacgaga
aaaggatacccgcttcttcatccggaagaactggtgctattctctgcaaaccagtaccag
caccccggatttccttttgtacctttgacccctgacctgcccgtagggtgggtggaaggt
acctattatgaggatgaagagccagttttcgttcctgcctccttggtgtatgtcaactgg
tataccaaccagtatcggcaagaaccgaaagttaactttcctgcgtttgctggagtagct
gcaggaaccagcagtgaccaggcgatattgtcgggtatcagtgaaattattgagcggcat
gccaccatggtgtggtggttgaatgcccagccgcttccgcacctggaattaccgcagaaa
tatttagatctttttagcgggacgaaagagccacttcgccccgctttgatcaatctagac
aacactttcaatattccggttctagccggggtagttcacaatgatgtctctaaactggta
cacgttggtttttcttgtcgttcgagcgttgaacaaggcgctttaaaagcttggagtgaa
gcgctcaccttacaagagggagctcacgacctcgcaaaccccgaaggggcacattggaca
gcaatccgtaaaggtctacttcctggacgttcatataagaaatggcgccgtgaccgccgc
tatctggatgatttccgtgaggatctcaaagatgtagatgacctcctaattcagcaagag
gtctttctagatcctcgcgcagtagacagagtgaaaccgctgttagatataccagcaacc
cgcagtatttcatctgtgccacagctgaaagatagccaactagctagttatatagagcgt
atccacgcccggggtatgcgggtaattaccgttgatatcacctctcgcgatgtcgcttct
tgcggactgcatgtgatccgcacattaattcccggcacgatcggcaatactcctgccgca
tttccctacctggggcgcaatatggtggcagaggaagcagtacggttaggatgggtggat
tcgccaagacctgaaggtagcatgaaccccttcccaatgccgcacgcgtag
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