KEGG   Varibaculum cambriense: CYK25_010685
Entry
CYK25_010685      CDS       T09090                                 
Name
(GenBank) YcaO-like family protein
  KO
K09136  ribosomal protein S12 methylthiotransferase accessory factor
Organism
vcb  Varibaculum cambriense
Brite
KEGG Orthology (KO) [BR:vcb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vcb03009]
    CYK25_010685
Ribosome biogenesis [BR:vcb03009]
 Prokaryotic type
  ribosomal protein modification factors
   CYK25_010685
SSDB
Motif
Pfam: YcaO
Other DBs
NCBI-ProteinID: WIK88600
LinkDB
Position
complement(2246636..2248606)
AA seq 656 aa
MADAEVIVCGDPTIARLITSELQKIDVTARLSSQSVRECAYQVFNRGALVVCRGDDPAPV
FAQTIEDNLGLNISVITVDHTPDQLLVGPAVLKGQGATYSDSLARLAGNAVNSAVFQAKM
GSPVWGSFLPRLGAATNMGHKAAELIKAITRNEIDNQKSTPLDTIWAISMDGELEVHAVL
PTNFMMGPQPKSPIHPPTFVVDKCYGIVKELTRVHHSAYMPPTLHTTQARTCDLRRTSTY
INTVFCQGSTLIPNEVGEAEKEAQIHDTELAAIGESVERYCSNLIDLKPILHGSYRELTR
KGYPLLHPEELVLFSANQYQHPGFPFVPLTPDLPVGWVEGTYYEDEEPVFVPASLVYVNW
YTNQYRQEPKVNFPAFAGVAAGTSSDQAILSGISEIIERHATMVWWLNAQPLPHLELPQK
YLDLFSGTKEPLRPALINLDNTFNIPVLAGVVHNDVSKLVHVGFSCRSSVEQGALKAWSE
ALTLQEGAHDLANPEGAHWTAIRKGLLPGRSYKKWRRDRRYLDDFREDLKDVDDLLIQQE
VFLDPRAVDRVKPLLDIPATRSISSVPQLKDSQLASYIERIHARGMRVITVDITSRDVAS
CGLHVIRTLIPGTIGNTPAAFPYLGRNMVAEEAVRLGWVDSPRPEGSMNPFPMPHA
NT seq 1971 nt   +upstreamnt  +downstreamnt
atggccgatgcagaggtaattgtctgcggcgatcccacaattgcgcgtttaataacttca
gagctccaaaagattgatgtcacggcgcgcctgtcttcccagtcagttcgcgaatgtgca
taccaagtcttcaatcgcggcgccctggtggtgtgtcgcggagatgatcctgctcccgta
tttgcgcaaactattgaagacaatctcggactaaatatttcagtgatcacggtggatcac
acccccgaccaactattggttggcccagcagtacttaaagggcaaggtgcaacttatagc
gacagtcttgctcgtctcgccggaaatgcagtcaatagtgcagtatttcaggcaaaaatg
ggtagccccgtatggggaagtttcttaccgcgcttaggtgcagccacaaatatggggcac
aaagcagcggaattaattaaagctattactcgcaatgaaatcgataaccagaaatcaacc
ccccttgacactatttgggcaatttccatggacggggagctcgaagttcacgcggtgctt
cccacgaattttatgatgggccctcagcctaaatccccgattcaccctcccacctttgtg
gttgataaatgctatggaatcgtaaaagagctcactcgggtacatcacagtgcctatatg
ccgcctacgttgcatactacccaggcgcgaacgtgtgatttacgcagaacatcaacttat
atcaacactgtattttgccaaggctcaacgttaatccccaatgaggttggagaagcagaa
aaagaagcgcagatccacgacactgaactagcggctattggtgaatcggtcgagcgttat
tgctctaacctaatcgatctcaaaccgatattacatggttcttatcgggaattaacgaga
aaaggatacccgcttcttcatccggaagaactggtgctattctctgcaaaccagtaccag
caccccggatttccttttgtacctttgacccctgacctgcccgtagggtgggtggaaggt
acctattatgaggatgaagagccagttttcgttcctgcctccttggtgtatgtcaactgg
tataccaaccagtatcggcaagaaccgaaagttaactttcctgcgtttgctggagtagct
gcaggaaccagcagtgaccaggcgatattgtcgggtatcagtgaaattattgagcggcat
gccaccatggtgtggtggttgaatgcccagccgcttccgcacctggaattaccgcagaaa
tatttagatctttttagcgggacgaaagagccacttcgccccgctttgatcaatctagac
aacactttcaatattccggttctagccggggtagttcacaatgatgtctctaaactggta
cacgttggtttttcttgtcgttcgagcgttgaacaaggcgctttaaaagcttggagtgaa
gcgctcaccttacaagagggagctcacgacctcgcaaaccccgaaggggcacattggaca
gcaatccgtaaaggtctacttcctggacgttcatataagaaatggcgccgtgaccgccgc
tatctggatgatttccgtgaggatctcaaagatgtagatgacctcctaattcagcaagag
gtctttctagatcctcgcgcagtagacagagtgaaaccgctgttagatataccagcaacc
cgcagtatttcatctgtgccacagctgaaagatagccaactagctagttatatagagcgt
atccacgcccggggtatgcgggtaattaccgttgatatcacctctcgcgatgtcgcttct
tgcggactgcatgtgatccgcacattaattcccggcacgatcggcaatactcctgccgca
tttccctacctggggcgcaatatggtggcagaggaagcagtacggttaggatgggtggat
tcgccaagacctgaaggtagcatgaaccccttcccaatgccgcacgcgtag

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