Varibaculum cambriense: CYK25_010730
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Entry
CYK25_010730 CDS
T09090
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vcb
Varibaculum cambriense
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcb03032
]
CYK25_010730 (gyrA)
03400 DNA repair and recombination proteins [BR:
vcb03400
]
CYK25_010730 (gyrA)
Enzymes [BR:
vcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CYK25_010730 (gyrA)
DNA replication proteins [BR:
vcb03032
]
Prokaryotic type
DNA Topoisomerases
CYK25_010730 (gyrA)
DNA repair and recombination proteins [BR:
vcb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CYK25_010730 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SIS
Motif
Other DBs
NCBI-ProteinID:
WIK88606
LinkDB
All DBs
Position
complement(2255414..2258086)
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AA seq
890 aa
AA seq
DB search
MSEIDNQDQNQQADSPEKPQHSGAAFGAGAGDASSPDALENNSGLFQAKGHINQVDLETE
MQRSYLDYAMSVIVGRALPEVRDGLKPVHRRILYAMYDGGYRPNAGFSKCMRVVGDVMGH
FHPHGDAAVYDALARLVQPWSMRYPMVAGQGNFGSPGNLGPAAPRYTECKMAPLSMEMVR
DIDEDTVDFMDNYDGRTQEPTVLPARLPYLLLNGSEGIAVGMATRIPPHNMREVADGVQW
ALAHPEASREELMEALIERIKGPDFPTGATILGRKGIESAYRTGRGSIVQRAIVNVEEIN
SRVCLVVTELPYQVNPDNLAAKIAGLVKDGQIEGIADIRDESSDRSGQRLVIVLKRDAVP
KVVLNNLYKRTQLQDSFPANMLALVDGVPRTLSIDGFISNWITHQLEVIVRRTNFRLKRA
QDRLHILQGYLMALDALDAVIATIRKSPTVDEARSALMELLGVDEVQADAILALQLRRLA
ALERQKILDEHTELEARVKDLQDILARPERQRGIISTELGEIVDKYGDERRTKIMPFAGE
MSMEDLIEEQDVVVTITHSGYVKRTRLDQYRSQKRGGKGIKGAQLREDDVVDHFFTTTTH
HWLAFFTNKGRVYRAKAYELPEGGRDSKGQHVANLLAFQPEEKIAQVLAFSSYDDAEYLA
LATRSGLVKKTRFTEYDSNRTGGLIAINLREMPDGTADEVVSAELVNGDDELLLVSHKGQ
SLRFLASDEALRPTGRATSGVRGMKFREGDHLLAMTVIRPDSDLLVVTEGGYAKRTSVEE
YRVQGRGGLGIKVANLVAERGGLVGALIVNDDDEVMVIMHSGKVQRSRVDEVPRTGRNTQ
GVIFTRPAEGDAVLAVALNNEKSEDDESLEATDEDLDQEVAALETEKTEL
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaatagacaaccaggatcaaaatcagcaagcagactccccggaaaagccccag
cactccggcgcggctttcggggcgggtgcgggggatgcctcctcgccagacgccctcgaa
aataattccggtcttttccaggcaaaagggcatattaatcaggttgacctagaaaccgag
atgcagcgctcctatctggattatgcgatgagcgtgatcgtagggcgtgccctgcccgag
gtgcgggatggtttgaagccggtacaccggcggattctgtatgccatgtatgacggtggc
taccgccccaacgccggattctccaaatgtatgcgcgtagtcggcgacgtgatggggcac
ttccaccctcacggtgacgccgcggtttacgacgccttggcacgcctggtgcagccctgg
tcaatgcgttatccgatggtggctggtcaaggtaactttgggtctcccggtaacctgggg
ccagcagctccgcgttatacggaatgtaaaatggcgcctttgtcgatggaaatggtgcgg
gacatcgatgaagacactgtcgatttcatggacaactatgatgggcgcacccaagaaccc
acggttttgcctgcccgcctgccctacctgctgcttaacggctcagaggggatcgcagtg
gggatggctacccggattcctccccataatatgcgggaagttgccgatggggtgcagtgg
gcattagcgcatcccgaggcttcgcgcgaggagctaatggaagccctaatcgagcggatt
aagggaccagatttccccacgggcgccactattttggggcgtaaagggattgaaagtgcc
tatcgcaccggtcgcggttccattgtgcagcgagcaatagtaaacgtagaagaaatcaac
tcccgggtttgcctggtggttaccgaacttccctaccaggtcaatccggataatctggca
gcaaaaatcgccggactggttaaagacggacagatcgagggcatcgcagatattcgcgat
gaatcctcggatcgctctgggcagcgcctggtgattgtgcttaaacgggacgcggttccc
aaggtggttttgaataacctctacaagcgcacccagttgcaggattccttccccgccaat
atgttggctctggtagatggggttccgcggacgctttctatcgatgggtttatctctaac
tggatcactcaccagctagaagtaatcgtgcgtcgcaccaatttccgcttgaagcgggcg
caggatcgcctccatattttgcaaggctacctgatggcgctggatgccttggacgcggtg
attgcgaccatccgtaaatctcccacggttgatgaagcgcgtagcgccctgatggaactg
ctcggggtagatgaagtccaggcggatgcgattctagctttgcagttgcgccgcctcgcc
gccctcgagcgacaaaagattctggatgaacacaccgagctagaggcgcgggtgaaggat
ttacaggatattttggctcgtcccgagcggcagcggggaattatttccaccgaactgggc
gagatcgtcgataaatacggcgatgaacggcgcaccaagattatgccgtttgccggggaa
atgtcgatggaagacctgattgaggaacaggacgtggtggtcactattacccattccggg
tatgtcaaacgcacccgcctggatcaataccgcagccaaaagcgcggcggtaaagggatc
aagggtgcgcagctgcgcgaagacgacgtggtagatcacttctttaccaccactactcat
cactggttggcgttcttcaccaataaaggacgggtttatcgggcgaaagcttacgaactt
cccgagggaggacgcgactctaaggggcagcacgtagctaacctgttggcgttccaaccg
gaagaaaaaatcgcgcaggttttggcgttcagttcctatgatgatgccgaatatttggcg
ctggctacccgctcggggctggtgaaaaagactcgctttaccgaatatgattccaatcgt
accggcgggctaatcgcgattaatctacgggaaatgcctgatggaacagctgacgaagtg
gtgtctgccgaactggtaaatggcgatgatgagctactattggtttctcataagggacag
tcgctgcgcttcttagcttccgacgaggctttgcgtcctactggtcgcgccacctctggg
gtgcggggcatgaagttccgcgaaggggatcacctgttggcgatgacagttatccgtccc
gatagtgaccttttggtggtgaccgagggcggatacgcgaaacgcacatcggtagaggaa
taccgggtgcaaggacgcggcggcctggggattaaggtcgctaatctggtggctgagcgt
ggcggcctggtgggcgccttgattgttaatgacgatgatgaagtcatggtgatcatgcat
tctggtaaagtgcagcgttcccgggtggacgaagttccccgcacgggacgcaacacccag
ggagtaattttcactcgtccggctgaaggtgatgcggttttggctgtagcgttaaataat
gagaaatcagaagatgatgaatcgttagaggctacggatgaggatctcgatcaagaagtg
gccgcgttagaaaccgaaaaaactgagctctag
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