Vibrio cyclitrophicus: FAZ90_00085
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Entry
FAZ90_00085 CDS
T06393
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vcc
Vibrio cyclitrophicus
Pathway
vcc00071
Fatty acid degradation
vcc00280
Valine, leucine and isoleucine degradation
vcc00310
Lysine degradation
vcc00362
Benzoate degradation
vcc00380
Tryptophan metabolism
vcc00410
beta-Alanine metabolism
vcc00640
Propanoate metabolism
vcc00650
Butanoate metabolism
vcc00907
Pinene, camphor and geraniol degradation
vcc00930
Caprolactam degradation
vcc01100
Metabolic pathways
vcc01110
Biosynthesis of secondary metabolites
vcc01120
Microbial metabolism in diverse environments
vcc01200
Carbon metabolism
vcc01212
Fatty acid metabolism
Module
vcc_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
FAZ90_00085 (fadB)
00650 Butanoate metabolism
FAZ90_00085 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
FAZ90_00085 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
FAZ90_00085 (fadB)
00310 Lysine degradation
FAZ90_00085 (fadB)
00380 Tryptophan metabolism
FAZ90_00085 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
FAZ90_00085 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
FAZ90_00085 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
FAZ90_00085 (fadB)
00930 Caprolactam degradation
FAZ90_00085 (fadB)
Enzymes [BR:
vcc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
FAZ90_00085 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
FAZ90_00085 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
FAZ90_00085 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
FAZ90_00085 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DUF5546
Motif
Other DBs
NCBI-ProteinID:
QCI69591
LinkDB
All DBs
Position
1:complement(19705..21876)
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQANTLQVKELQDGIAELSFCAPASVNKLDLATLESLDKALDALNAHAGLRGLILTSN
KDAFIVGADITEFLGLFAKPEAELDEWLRFANSIFSKLEDLPVPTLSMMRGHALGGGCEC
VLATDFRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEIITQGKACRADEALK
VGLLDAIVETDQLLESAINTVSLAANEKLDWQLRRKQKTSALSLSKLEAMMSFTMAKGLV
AQKAGPHYPAPITSVIAIEEAARSDRDAALDIERKHFVKLAKSEEAKALVGLFLNDQYIK
GLAKQAGKSANKATERAAVLGAGIMGGGIAYQSALKGVPVMMKDIAQASLDLGMSEASKL
LNKRLSRGRLDGFKMAGILSSITPSLHYAGVEQSDVIVEAVVENPKVKAAVLSEVEGLVG
EDTVLTSNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEHTSEETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTKIDKVMERKFGWPMGPAY
LLDVVGLDTAHHAQAVMAQGFPERMGKEGRDAIDALYVAEKYGQKNGSGFYTYSVDKRGR
PKKTFSEDILPILADVCQQPQDFDDQTIIQRVMIPMINEVVLCLEEGIIATPQEADMALV
YGLGFPPFRGGVFRYLDSVGIGNFVEMAKSYQDLGAMYQVPQLLLDMAAKGESFYDGQQA
SSL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagctaacaccttacaggtaaaggaattacaagacggtattgcagaactt
agcttctgtgcgccagcctctgtaaacaaactcgaccttgctactttagaatcactagat
aaagcgttagatgctcttaatgctcacgctggattacgtggtttaatcttaacttcaaac
aaagacgcgttcatcgtaggcgcagacatcactgaatttcttggcctatttgctaagcca
gaagcagaacttgatgaatggttaagattcgcgaattcaatcttcagcaagctcgaagac
cttcctgtcccaactctttcaatgatgcgtggccatgccctaggtggcggctgtgaatgt
gtcttagcgaccgatttccgtatcggtgacaagaccaccagcataggtctcccagaaacc
aaactgggcatcatgcctggctttggtggttgtgtacgcctgccacgtgttataggtgct
gacagcgcaatggaaattatcacgcaaggcaaagcatgtcgtgcagatgaagcacttaaa
gttggcttgttagatgcgattgttgaaaccgaccaactactagaatcagcgattaacacg
gtttctttggcagccaatgagaaacttgattggcagctacgccgtaaacaaaaaacatca
gcgctttcgctaagcaaactagaagcgatgatgagctttactatggctaagggcttagta
gctcaaaaagcaggacctcattacccagccccaatcacttctgttatcgctatcgaagaa
gcagcacgtagtgatcgtgatgctgcattggatatcgagcgtaaacacttcgttaagcta
gcaaaatctgaggaagcgaaagcattggtcggcttattccttaatgaccaatacatcaaa
ggcctagcgaaacaagcgggtaagtctgccaacaaagctactgaacgtgcagcagtactt
ggtgctggcatcatgggtggcggtattgcttaccagtcagcattgaaaggcgtgccagtg
atgatgaaagacatcgcacaggcgtctctagatcttggtatgagcgaagcttctaagttg
ttgaataagcgcttatcacgcggtcgcctagatggattcaaaatggcaggcattctgtct
tctattaccccaagcctacattacgctggggttgagcagtcagatgtgattgtggaagcg
gttgtagaaaaccctaaagtaaaagcagcagttttgagcgaagtggaaggtttggttggt
gaagacacagttcttacatcaaacacctcaacgattccaatcaacctgttagcgaaatct
ttgaaacgcccagaaaatttctgtggcatgcatttctttaatccagtacatcgcatgcct
ttggttgagatcatccgaggtgagcacacttcagaagaaaccattaatcgcgtagtcgct
tacgcagcgaagatgggtaaatcccctatcgttgttaacgactgtccaggcttcttcgtt
aaccgtgtacttttcccttacttcggcggtttcagcatgttgctacgcgacggtgctgat
ttcacaaagatcgataaagtcatggagcgcaaattcggttggccaatgggcccagcttac
ttgctagacgttgtaggtttagacacagcacaccatgcacaagcagtaatggcacaaggc
ttccctgaacgtatgggcaaagaaggtcgtgatgcgattgacgcactttacgtagctgaa
aaatatggtcagaagaacggcagcggtttctatacatacagcgtggacaaacgcggtcgc
cctaaaaagaccttctctgaagacattcttcctatcttggctgacgtatgccaacagcca
caagactttgatgaccagacaattatccagcgcgtgatgattccaatgatcaacgaagtg
gtgctttgtttagaagaaggcatcatcgcgacaccgcaagaagcggatatggcactggtt
tacggtttaggtttccctccattcagaggcggcgtattccgctacttagacagtgtgggt
attggtaacttcgttgaaatggcgaagagctaccaagacttaggtgcaatgtaccaagtt
cctcaactattgcttgatatggcagcgaagggcgaaagcttttacgacggccaacaagcc
agttctctgtaa
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