Vibrio cyclitrophicus: FAZ90_00160
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Entry
FAZ90_00160 CDS
T06393
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
vcc
Vibrio cyclitrophicus
Pathway
vcc00730
Thiamine metabolism
vcc01100
Metabolic pathways
vcc01240
Biosynthesis of cofactors
Module
vcc_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
FAZ90_00160 (thiC)
Enzymes [BR:
vcc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
FAZ90_00160 (thiC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QCI69597
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Position
1:33553..35502
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AA seq
649 aa
AA seq
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MSSRKQARLEAKNFIDSLSVQPYPNSKKAYIQGSREDIQVPVREISLADSLVGGTKKEPV
FEPNVPIQVYDTSGVYTDPTHQIDLYSGLPKLREQWIDERGDTELLDDVSSVYTKERLED
ETLDDLRYGNLPRIRRATGGQCVTQLHYARQGIITPEMEYIAIRENMGRQKFADEQLNHQ
HPGHNFGANLPKEITSEFVRKEVAEGRAIIPSNINHPESEPMIIGRNFLVKVNANIGNSS
VSSSIEEEVEKLVWSTRWGGDTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVN
GVAEDLNWEVMRDTLIEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCL
AHHQESFLYTHFREICEICAKYDVALSLGDGLRPGSIADANDEAQFSELRTLGELTKVAW
EYDVQVIIEGPGHVPMHLIKENMDEQLEHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAM
IGWYGCAMLCYVTPKEHLGLPNKEDVKTGLITYKLAAHAADLAKGHPGAQIRDNALSKAR
FEFRWEDQFNLALDPETARSFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVREYAKDT
EQVAADQAIEIKMLDNPLEGMRQKSQEFRDTGSELYHPAVGAKEAQLEE
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtcgtaaacaagcaagactggaagcgaagaatttcattgattctttatccgta
caaccttatccaaattcaaaaaaagcttatatccaaggatctcgcgaggacattcaagtc
cctgtacgagaaatatcactcgctgatagccttgttggcggtaccaaaaaagagcctgta
ttcgaacctaatgtacccattcaagtttacgatacctcaggtgtttacactgaccctaca
catcaaatagacctgtatagcggccttcctaagttgcgtgagcaatggattgatgagcgt
ggtgatacggaactgttagatgatgtaagctctgtttacactaaagagcgtttagaagat
gaaactctagacgaccttcgttacggcaacctacctagaattcgtcgtgcgactggaggt
caatgtgttactcagctgcattatgctcgtcaggggattatcactcctgagatggagtac
attgcgatacgtgagaacatgggacgccagaagttcgctgatgagcagctgaaccatcaa
caccctggccataactttggcgcgaacctacctaaagaaattacctctgagttcgtacgt
aaagaggttgctgaaggccgagctattattccttcaaacatcaaccatccagaatcagaa
ccgatgattatcggccgaaacttcttagtgaaggtgaacgccaatatcggtaactcttca
gtaagctcttcgattgaagaagaagttgagaaattagtatggtcaactcgttggggtggc
gataccgtgatggacctttccaccggccgcaatatccacgagactcgcgaatggatcttg
cgtaatagtccggtgccaattggtacggttcctatgtatcaagcgcttgaaaaagtgaat
ggcgtagccgaagaccttaactgggaagtgatgcgcgataccttgattgaacaagcagag
caaggtgttgactacttcactatccatgctggtttgttgcttcgctacgttccgatgacg
gctaaacgtgtgaccggtattgtttctcgtggtggttctattatcgcgaaatggtgtctt
gctcatcaccaagaaagtttcctttatacccacttccgagagatctgtgagatctgtgcg
aagtacgatgttgcactgtcattgggtgatggcctacgccctggttctattgcagatgcc
aatgatgaggctcagttctcggagttacgtactctaggtgagttgactaaagtggcttgg
gaatatgatgttcaggtgatcattgaaggccctggacatgtgccaatgcacttaataaag
gagaatatggacgagcagttagagcactgccacgaagcgcctttctatactttaggtcca
ctgacgacagatattgcacctggttacgaccatattacctctggaattggcgcggccatg
attggttggtacggctgtgcgatgctctgttatgtcactcccaaagaacatttaggctta
ccaaacaaagaagacgtgaagactggcttgattacttacaagctggcagcacatgcagca
gacttggcaaaaggacatccaggtgcacaaatccgagataatgcgttatcaaaggcgcgt
tttgaattccgttgggaagaccaattcaatctagctttagatccggaaaccgcgcgttct
ttccatgatgaaactttaccgcaggagtcgggtaaggttgctcacttctgctcaatgtgt
ggaccaaaattctgctcgatgaagatctctcaggaagttcgagagtatgcgaaagataca
gaacaagtagcggctgatcaggctatcgagattaagatgttggataacccactagaaggg
atgcgtcaaaaatcacaagagtttcgtgatactggctctgaactttaccaccctgcagta
ggtgcaaaagaagctcaactagaggaataa
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