Vibrio cyclitrophicus: FAZ90_00265
Help
Entry
FAZ90_00265 CDS
T06393
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vcc
Vibrio cyclitrophicus
Pathway
vcc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FAZ90_00265 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcc03019
]
FAZ90_00265 (recQ)
03400 DNA repair and recombination proteins [BR:
vcc03400
]
FAZ90_00265 (recQ)
Enzymes [BR:
vcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FAZ90_00265 (recQ)
Messenger RNA biogenesis [BR:
vcc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FAZ90_00265 (recQ)
DNA repair and recombination proteins [BR:
vcc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FAZ90_00265 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QCI69617
LinkDB
All DBs
Position
1:55303..57141
Genome browser
AA seq
612 aa
AA seq
DB search
MTATLIAEQIPTPANDAQNILQDVFGYQSFRDGQQEVIDLAVEGKDSLVIMPTGGGKSLC
YQIPALVREGLTLVISPLISLMKDQVDQLKANGVAAECINSSMPREKLISVFNRMNSGQL
KMVYVSPERVLMRDFIERLQGLPLSMIAVDEAHCISQWGHDFRPEYASLGQLKQYFPHVP
YMALTATADDATRKDIISRLQLVEPHTYLGSFDRPNIRYNLVEKHKPVSQVVRYLETQKG
NCGIIYCGSRKKVEMVTEKLCNNGLRAAGYHAGMDTDERAYVQEAFQRDDIQIVVATVAF
GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLFDPADMGWLRRMLDEKE
EGPQKQVEMHKLNAMSAFAEAQTCRRQVLLNYFGEYREKQCGNCDICLDPPKHFDATQEA
QKALSCVYRVNQSFGMGYVVEVMRGMQNIRVRDNGHDKLSTYGIGRDHSHDYWISIFRQL
IHKGLLFQNITRNSTLQLTEEARPLLRGEMSLELAVPRLDTAVRNAKSDKLSSKNYDKKL
FAKLRKLRKSIADEDGLPPYVVFSDATLIDMAEILPTSYGEMLAVNGVGQRKLDKYADPF
LDLIQEHITTHG
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccactctgattgctgagcaaataccgactcccgcgaatgatgcgcaaaacatc
ttacaagatgtctttggttatcaaagttttcgcgatggtcagcaagaggtcatcgatctt
gccgttgaaggcaaagatagcttggtgattatgccaactggtggcggtaagtcgctgtgt
tatcaaattccggccttggttcgtgaagggttaactttggttatctcaccactgatctcg
ctaatgaaagaccaagttgaccaattgaaggccaatggcgtcgctgctgagtgcattaac
tcgtcgatgccaagagaaaagctaatctcggtgtttaatcgcatgaactcaggccaattg
aaaatggtctatgtttcgccagagcgggtgttgatgcgtgactttatcgagcgtctacaa
gggcttcctctttcaatgatcgcagtcgatgaagcgcactgtatctctcagtggggacac
gacttccgccctgaatatgcatcattggggcaacttaaacagtacttcccgcatgtacct
tatatggcgctaacggcaaccgctgacgatgcgacgcgcaaagatattatctcgcgtttg
cagttggtggagccgcacacttatttaggcagcttcgatcgtcctaatattcgttacaac
cttgtagagaaacacaagccagtgtctcaggtggttcgctacctagaaacacagaaaggt
aattgcggcattatctactgtggtagccgtaaaaaagtggaaatggtgaccgagaagctg
tgcaataacggtcttcgtgcggcgggttatcatgccggaatggacactgatgagcgtgct
tatgtgcaagaggccttccaacgcgatgatattcagatcgtcgtggcgactgtggcgttt
ggtatgggtatcaataaacccaatgtacgctttgtggtgcactttgatattccacgtaac
atcgaatcttactatcaagagactggccgtgcgggtcgtgatggcttgcctgctgaagct
atgatgctgtttgaccctgctgatatggggtggctgcgtcgcatgctggatgagaaagaa
gaaggcccacagaaacaagttgaaatgcacaagctgaacgcgatgagtgcctttgctgaa
gcgcaaacttgtcgtcgtcaggttctgcttaattactttggcgaatatcgtgagaagcaa
tgtggtaactgcgatatttgcttagatccaccaaaacactttgacgcgacccaagaagcg
caaaaggcgttgtcttgtgtgtaccgcgtaaatcagtcatttggtatgggttacgtggtt
gaagtgatgcgtggtatgcagaacatccgtgtgcgcgataatggtcacgataagttgtct
acttacggtattggtcgcgatcacagccacgactactggatcagtatcttccgtcagtta
attcacaaaggcttgttgttccagaacatcactcgtaactcgactttgcagttaaccgaa
gaagcacgcccgctgttacgcggtgaaatgtctttggagttggcagtgcctcgtttggat
accgcagttcgtaatgctaagtccgataagttaagtagcaagaactacgataagaagctg
tttgccaaactgcgtaagctgcgtaagtcgattgctgatgaagatggcttaccaccttat
gttgtcttcagtgatgcgaccttgattgatatggccgaaatcctacccacatcttacgga
gagatgttggcagtgaatggtgtcggtcaacgcaaactcgataagtacgctgatccattc
ttagatttgattcaagaacacatcaccacacacggctaa
DBGET
integrated database retrieval system
