Vibrio cyclitrophicus: FAZ90_00405
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Entry
FAZ90_00405 CDS
T06393
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vcc
Vibrio cyclitrophicus
Pathway
vcc00300
Lysine biosynthesis
vcc00470
D-Amino acid metabolism
vcc01100
Metabolic pathways
vcc01110
Biosynthesis of secondary metabolites
vcc01120
Microbial metabolism in diverse environments
vcc01230
Biosynthesis of amino acids
Module
vcc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FAZ90_00405 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FAZ90_00405 (lysA)
Enzymes [BR:
vcc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FAZ90_00405 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
QCI69634
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Position
1:87028..88281
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AA seq
417 aa
AA seq
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MDYFNYQEDGQLWAEDVALSQLAEQYGTPLYVYSRATLERHWNAFDSSVGEHPHLVCYAV
KANSNLGVLNTLARLGSGFDIVSGGELERVVAAGGDPAKVVFSGVGKTAAEMKRALELNI
KCFNVESEPELERLNKVAGELGVKAPISLRINPDVDANTHPYISTGLRDNKFGIAFDRAP
AVYAFAKTLDNLSIHGIDCHIGSQLTDIEPFIDATDRLLALIDQLRSDGINIKHLDVGGG
LGVVYRDELPPQPSDYAKALLARLDNHSDLELIFEPGRAIAANAGVLLTKVEFLKPTEHK
NFAIIDAAMNDLMRPALYQAWQDIVPVSPRQGEAVTYDLVGPICETGDFLGKDRDLVLEE
GDLLAVRSAGAYGFAMSSNYNTRSRAAEVMVDGDKTHLVRQREELTSLWELENILPE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggattacttcaactatcaggaagatggccagctttgggctgaggacgtcgcactttca
caactagcagagcaatatggtacaccgctgtatgtatattctcgtgcaacattagaacgc
cactggaatgcgtttgattcatcggttggtgagcacccacacttagtgtgttatgccgtt
aaagctaactcaaacctcggcgtattgaatactttggctcgtttgggctctggttttgat
attgtttctggtggtgagttagagcgtgtggttgctgcaggtggcgatccagctaaagtt
gtgttctctggtgttggtaagacagccgcagaaatgaagcgtgcgcttgagttaaacatt
aagtgtttcaatgtagagtctgagccagaactagagcgactaaataaagtggcaggtgaa
cttggtgttaaagcgccgatttctctgcgtatcaacccagacgttgatgcgaacactcac
ccttacatttctacaggtctgcgtgacaacaagtttggtattgcgttcgaccgtgcccct
gccgtctatgcttttgcaaaaacactcgataacttgtctatccatggtattgattgtcac
atcggttctcagttaaccgatatcgaaccttttatcgatgccactgatcgcctgctcgcg
ctgattgatcagctgcgttctgatgggattaacatcaaacaccttgatgtcggcggcggc
cttggtgtggtttatcgtgatgaattaccaccacagccttcagattacgcaaaagcttta
ttggctcgcttagacaatcattctgatctagagctgattttcgagcctggaagagcgatt
gctgctaacgctggtgtattattgacgaaagtcgagttcctcaagccaacagagcataag
aactttgccatcatcgatgcggcaatgaacgacctgatgcgccccgcactttatcaagct
tggcaagatattgtgccagtcagccctcgtcagggtgaagccgtgacttacgacttggtt
ggtccgatctgtgaaacgggtgacttcttaggtaaagatcgtgaccttgttctcgaagaa
ggcgacctactagcagttcgttcagctggtgcttatggcttcgcgatgtcatctaactac
aacactcgttcgcgtgcggctgaagtgatggtggatggcgataaaactcacttggttcgt
cagcgtgaagagcttacgagtttgtgggaacttgaaaacattcttccggagtaa
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