Vibrio cyclitrophicus: FAZ90_00560
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Entry
FAZ90_00560 CDS
T06393
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
vcc
Vibrio cyclitrophicus
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcc03021
]
FAZ90_00560 (rpoH)
Transcription machinery [BR:
vcc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FAZ90_00560 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_25
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
QCI69663
LinkDB
All DBs
Position
1:116231..117088
Genome browser
AA seq
285 aa
AA seq
DB search
MANQAYQMALVTQDSLDSYIRSANSYPMLTPEEERGLAERLHYKGEIDAAKGLILSHLRF
VVHVARGYSGYGLPMADLVQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKIATTKAQRKLFFNLRKSKKRLGWFNNGEVETVARELGVEPSEVREMESRLAAQDA
TFEAPMDDDDGGSAYTAPVYYLEDKASDVAETVEAANWESHTNNRLGLALKSLDERSQHI
VRSRWLDDNKATLQDLADTYSISAERVRQLEKNAMKKLKQAVGDF
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccaagcgtatcaaatggctttagtcacacaagatagtttagatagctatatc
cgatcagcgaacagctacccaatgctgacccctgaagaggaacgtggacttgcagagcga
ttacattacaaaggtgagatcgatgctgcgaaaggcttgatcctttcccacctacgattc
gtggtacacgttgcaagaggatattctggctacgggttaccaatggctgatcttgtccaa
gaaggtaacatcggcttaatgaaggctgttaagcgcttcaacccagaagttggtgttcgt
ctagtatcttttgctgttcactggatcaaagctgagattcatgagtacgtattgcgtaac
tggcgtattgttaagatcgcaacgactaaagcacagcgtaaattgttctttaacctacgt
aagtctaaaaagcgtttaggttggttcaataatggtgaagtcgagactgttgctcgtgaa
ttaggtgtcgagccttcagaggttcgtgaaatggaatctcgtttagcggctcaagatgct
acgtttgaagcgcctatggatgatgacgacggtggctctgcttatactgcaccagtttat
taccttgaagacaaagcatcagatgttgctgagacagttgaagccgctaactgggaatct
cataccaacaatcgtttaggtctcgcattgaagagcttagatgagcgtagccaacacatt
gttcgctcacgttggttagatgacaacaaagctacactgcaagaccttgccgatacttac
agcatttctgcagaacgtgttcgtcagttagaaaagaatgcgatgaagaagttgaagcaa
gctgttggcgacttttaa
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