Vibrio cyclitrophicus: FAZ90_00870
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Entry
FAZ90_00870 CDS
T06393
Symbol
hupA
Name
(GenBank) DNA-binding protein HU-alpha
KO
K05787
DNA-binding protein HU-alpha
Organism
vcc
Vibrio cyclitrophicus
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcc03032
]
FAZ90_00870 (hupA)
03036 Chromosome and associated proteins [BR:
vcc03036
]
FAZ90_00870 (hupA)
03400 DNA repair and recombination proteins [BR:
vcc03400
]
FAZ90_00870 (hupA)
DNA replication proteins [BR:
vcc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FAZ90_00870 (hupA)
Chromosome and associated proteins [BR:
vcc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
FAZ90_00870 (hupA)
DNA repair and recombination proteins [BR:
vcc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
FAZ90_00870 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
UBA_HYPK
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QCI69703
LinkDB
All DBs
Position
1:179570..179842
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AA seq
90 aa
AA seq
DB search
MNKTQLIDFIAEKADLSKAQAKAALEATLGGVTDALKDGDQVQLIGFGTFKVNHRAARTG
RNPKTGDEIQIAAANVPAFVAGKALKDSVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagactcaattaatcgactttattgctgaaaaagcggacctttctaaagcacaa
gctaaagctgctctagaagcgactcttggtggtgttacagatgctcttaaagacggcgat
caagttcagctaattggttttggtacttttaaagtaaaccaccgtgcagctcgcactggt
cgtaacccaaaaactggtgatgagatccaaatcgctgcggcaaatgttccagcatttgtt
gcaggtaaagcgctgaaagattcagtgaaataa
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