Vibrio cyclitrophicus: FAZ90_03125
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Entry
FAZ90_03125 CDS
T06393
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vcc
Vibrio cyclitrophicus
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcc03016
]
FAZ90_03125 (truB)
Enzymes [BR:
vcc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FAZ90_03125 (truB)
Transfer RNA biogenesis [BR:
vcc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FAZ90_03125 (truB)
Prokaryotic type
FAZ90_03125 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QCI70096
LinkDB
All DBs
Position
1:630348..631301
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AA seq
317 aa
AA seq
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MARRRKGRPINGVILLDKPTGISSNDALQKVKRIYFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYVVIAKLGERTNTSDSDGEVVETREVNVTQEQLERCIASFKGETDQ
IPSMFSALKYQGKPLYEYARAGIEVPRESRKITVYSIELLRFEGDEVEMEVHCSKGTYIR
TITDDLGEMLGCGAHVTMLRRTGVAKYPYERMVTLEQLNEILEQAQAQEIAPKELLDPLL
MPMDTAVEDLPEVNLNAELTDLVQHGMPVQVSGAPTEGTVRMTSGEEKLFVGVAQIAEDG
RVAPKRLVVFRDEEPQA
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccgtcgtaaaggtcgccctattaacggggtaattctgttagataagcctact
ggtatttcatctaatgatgcactgcaaaaagtaaagcgtatttactttgcagagaaggca
gggcacacaggtgctctggatcctcttgcgactggcatgctgccaatttgtcttggtgag
gcaacgaagttttctcagtttcttctagattctgataagcgctacgtagtaatcgctaag
cttggtgagcgtaccaacacctctgactctgatggtgaagtggttgaaactcgtgaagtg
aatgtgactcaagaacaacttgaacgttgcattgcaagctttaagggtgaaaccgaccag
atcccatcaatgttctcggcattgaagtatcaaggtaagcctttgtacgaatacgctcgc
gcaggtattgaagtacctcgagagtctcgtaagatcactgtgtactctattgaattgctt
cgctttgaaggtgatgaagttgaaatggaagtgcattgttcgaaaggcacttacattcgc
acaattaccgatgaccttggtgaaatgctaggttgtggtgctcacgtgacaatgcttcgt
cgtactggtgtagcaaagtacccttatgaacgtatggtgactttggagcagttaaacgag
atcctagagcaagcacaagcgcaagaaattgcaccaaaagagctgcttgatccacttctg
atgccaatggacactgccgtagaagacttaccagaagtgaatttgaacgcggaactgact
gacctagttcagcacggcatgccagttcaggtttctggtgcaccaactgaaggcacggtt
cgtatgacaagtggtgaagaaaagctgtttgttggcgttgctcagattgcagaagatggc
cgagttgcacctaagcgcttggtggttttcagagatgaagagccacaagcgtag
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