Vibrio cyclitrophicus: FAZ90_03240
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Entry
FAZ90_03240 CDS
T06393
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vcc
Vibrio cyclitrophicus
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcc03400
]
FAZ90_03240 (radA)
DNA repair and recombination proteins [BR:
vcc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FAZ90_03240 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
SLFN-g3_helicase
GvpD_P-loop
AAA
AAA_22
RecA
Rad51
AAA_14
ABC_tran
AAA_16
NTPase_1
nSTAND3
Viral_helicase1
Zeta_toxin
AAA_24
Zn_ribbon_Thio2
AAA_29
AAA_5
DUF7125
Zn_ribbon_8
cobW
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QCI70119
LinkDB
All DBs
Position
1:657369..658748
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AA seq
459 aa
AA seq
DB search
MAKAKRAYVCNDCGADFPRWQGQCNACGAWNTITEVRLAASPQVARNERLSGYAGSVTES
SVQTLSEINLQEVPRFSSGFKELDRVLGGGVVPGAAILIGGNPGAGKSTLLLQTMCQLSS
QLPTLYVTGEESLQQVAMRASRLGLPKEHLKMLSETNVDKICQVAEKEQPKIMVIDSIQV
MHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFLVGHVTKDGTLAGPKVLEHIIDCSV
LLDGGTDSRFRTLRSHKNRFGAVNELGVFAMTGQGLKEVSNPSAIFLSRGEEETSGSSVM
VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN
VVGGVKVTETSADLALVMALLSSFRDRALPKDVVVFGEVGLAGEIRPVPSGQERLNEAFK
HGFKKAIVPAANMPKGGIPGMQIHGVKKLSEAINAFDEL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggcaaaacgagcttatgtgtgtaatgactgtggcgctgactttccacgttgg
caagggcagtgcaacgcatgtggtgcttggaacacgattacagaagttaggttagccgct
tcacctcaggtagcgcgcaatgaaagattatctggttatgctggttctgtaacagaatcg
agcgttcagacattatctgaaattaatctacaagaagtgccacgttttagcagtggtttc
aaagaactcgatcgcgtactcggtggtggtgttgttcctggcgctgcgatcctgattggt
ggtaaccctggggcaggtaaatcaacgctgttattgcagaccatgtgtcagctctcttct
caattaccgacactttatgtaaccggcgaagaatccctacagcaggttgcaatgcgcgct
tctagacttgggttgccaaaagagcacctaaagatgctctctgagaccaacgttgataag
atctgccaggttgctgaaaaagaacagccaaagatcatggtcatcgactcaatccaagtt
atgcatgtagctgatgttcaatcttcaccgggcagtgttgcccaggttcgtgagtcggca
acggcgttaacgcgatacgcgaagcagaataacgttgctgtgttcttagttgggcacgtc
actaaagatggtacgttggcgggaccaaaagtgcttgaacacattatcgattgttctgta
ctgctagatggcggaacagatagtcgattcagaactctgcgtagtcacaaaaaccgtttt
ggtgcggtcaatgagttgggtgtgtttgcaatgacaggccaaggccttaaagaagtcagt
aatccatcggctattttcctatctcgaggcgaagaagaaacgtcaggtagttctgttatg
gtggtatgggaagggacacgtccacttcttgttgaaatccaggcactggtggattattcc
cagctggcaaatccgcgccgtgttgcagttggtttagaacaaaacagactttcgttgtta
ttagcggtgctgcataaacacgggggcttacaaatggctgaccaagatgtgtttgtgaat
gtcgtcggtggtgttaaagtaaccgaaaccagtgctgatcttgctttagtgatggcatta
ctttcgagtttcagagaccgcgcattgccaaaagatgtggtggtatttggcgaggtaggc
ttagcgggtgagattcgaccggtaccaagtgggcaagaacgtcttaatgaagcctttaaa
cacggtttcaagaaagcgattgtaccggcagcgaacatgccgaaaggtggcattccagga
atgcagatccacggtgtgaaaaaattatcagaagcaattaatgcttttgatgagttgtaa
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