Vibrio cyclitrophicus: FAZ90_03960
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Entry
FAZ90_03960 CDS
T06393
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vcc
Vibrio cyclitrophicus
Pathway
vcc03030
DNA replication
vcc03430
Mismatch repair
vcc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FAZ90_03960 (dnaQ)
03430 Mismatch repair
FAZ90_03960 (dnaQ)
03440 Homologous recombination
FAZ90_03960 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcc03032
]
FAZ90_03960 (dnaQ)
03400 DNA repair and recombination proteins [BR:
vcc03400
]
FAZ90_03960 (dnaQ)
Enzymes [BR:
vcc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FAZ90_03960 (dnaQ)
DNA replication proteins [BR:
vcc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FAZ90_03960 (dnaQ)
DNA repair and recombination proteins [BR:
vcc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FAZ90_03960 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QCI70258
LinkDB
All DBs
Position
1:812357..813124
Genome browser
AA seq
255 aa
AA seq
DB search
MNTSSTPEQSTNEKNSSNENKRIVVLDTETTGMNTEGGPHYMGHRIVEIGAVEIINRRLT
GRHFHVYIKPDRAIQEEAIGVHGITDEFLIDKPEYQDIHKEFLDFIKGAELVAHNAPFDT
GFMDYEFEKLNPAIGKTDDYCKVTDTLAMAKKIFPGKRNNLDILCDRYGIDNSHRTLHGA
LLDAEILADVYLLMTGGQTSLQFNAGQQEGEAESIRRVESGRKSLKVLRATADEVEAHQN
RLDLVEKSGSCLWRQ
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaataccagtagcactccagaacaaagcacgaacgaaaaaaacagttcgaacgaaaat
aagcgcattgttgtactcgataccgaaaccacaggtatgaatacagaaggtggtcctcac
tatatgggccaccgcatcgttgaaattggtgcagtagagatcatcaaccgtaggttgacc
gggcgtcatttccacgtgtacatcaagcccgatcgtgcgattcaagaagaggcgattggc
gttcatggtattaccgatgaattcttgattgataagcctgaataccaagatatacataaa
gagtttctcgactttatcaaaggtgcggagctggtggctcataatgcgcccttcgatacg
ggttttatggactatgagtttgagaagcttaatccagcgataggtaaaacggatgactac
tgcaaagtcaccgataccttggcaatggcgaagaagatattcccaggtaaaagaaacaac
ctagatatcttatgtgaccgttacggtattgataactcgcaccgtactctccacggcgca
ttgctcgatgcggagatcctagccgacgtctacttattgatgacgggtgggcaaacttcg
ctacaatttaacgctggccaacaagaaggcgaagccgaaagtatacgaagagtagaaagt
ggtcgaaaatccctaaaggttttacgagctacggccgatgaagtagaagcgcatcaaaat
cgtttagacctcgtcgagaaaagcggaagctgcctttggcgtcagtag
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