Vibrio cyclitrophicus: FAZ90_04475
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Entry
FAZ90_04475 CDS
T06393
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vcc
Vibrio cyclitrophicus
Pathway
vcc00061
Fatty acid biosynthesis
vcc00071
Fatty acid degradation
vcc01100
Metabolic pathways
vcc01212
Fatty acid metabolism
vcc02024
Quorum sensing
vcc04146
Peroxisome
Module
vcc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FAZ90_04475 (fadD)
00071 Fatty acid degradation
FAZ90_04475 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FAZ90_04475 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
FAZ90_04475 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vcc01004
]
FAZ90_04475 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcc04147
]
FAZ90_04475 (fadD)
Enzymes [BR:
vcc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FAZ90_04475 (fadD)
Lipid biosynthesis proteins [BR:
vcc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FAZ90_04475 (fadD)
Exosome [BR:
vcc04147
]
Exosomal proteins
Exosomal proteins of breast milk
FAZ90_04475 (fadD)
Exosomal proteins of breast cancer cells
FAZ90_04475 (fadD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4235
Motif
Other DBs
NCBI-ProteinID:
QCI70357
LinkDB
All DBs
Position
1:918081..919775
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AA seq
564 aa
AA seq
DB search
MDKPWLSRYPSDVPETINPDQYPSLIEMFEQSVQKYADQPAFENMGSIMTFRKLEERSRA
FAAYLQNDLKLKKGDRVALMMPNLLQYPIALFGVLRAGMIAVNVNPLYTPRELEHQLNDS
GAKAIVIVSNFASTLEKVVDNTPVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDL
PGAISFRKALHKGRRLQYVKPFMAGDDIAFLQYTGGTTGVAKGAILTHRNMIANVLQAKG
AYGPVLQEGRELVVTALPLYHVFALTVNCLLFVEMGGRNLLITNPRDIPGFIKELQKVPF
TAITGVNTLFNALVNNEDFHELDFSNLRLSVGGGMAVQRAVAEQWKKVTGIHLLEGYGLT
ECAPLVTGNPYDLKDYTGAIGLPVPSTEVRIIDDEGKVIANDQVGELQVRGPQVMQGYWQ
RPEATKEVIDQDGWLSTGDIVKFDEEGLLYIVDRKKDMILVSGFNVYPNEIEDVVALHGK
VLEVAAIGQPHEVSGELVKIYVVKRDPSLTKEDIIAHCREHLTGYKIPKLIEFREELPKT
NVGKILRRVLREENDAELAKRASE
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
gtggataaaccttggctttcacgttatccaagtgacgtaccagaaacgatcaacccagat
cagtacccatctcttattgaaatgttcgaacagtcggtacagaagtacgcagaccaaccg
gcattcgagaacatggggtctatcatgacattccgtaagcttgaagagcgcagtcgtgct
tttgctgcttacctgcagaatgatctgaaactgaagaaaggcgatcgtgtcgcacttatg
atgccaaacctgctgcaatacccaattgcactctttggtgtattgcgtgcaggtatgatt
gcagtgaacgtcaacccgctgtatacgcctcgtgaacttgaacatcaactgaacgattct
ggtgcaaaggcgattgtgatcgtatctaactttgcgagtacgctagaaaaagtggtggac
aacactccagttaaacacgttgttctaaccagtctagggcaaatgctgccgcgtgctaaa
ggaacaattgtcgacttcgttgtgaaatacgtaaaaggtatggtacctaagtatgatctg
ccgggtgctatctcgtttcgaaaagcgctgcacaaaggccgtcgtctgcaatatgtgaag
ccgtttatggcgggtgatgacatcgcgttcctacagtacacgggtggcacaacgggcgta
gcgaaaggcgcaatcctaacgcatcgcaatatgattgcgaacgtacttcaagcgaaaggg
gcatacggccctgtattgcaagaaggccgagaactggtggtaacagctttgccgctatac
cacgtattcgcgctgactgtgaactgtttattgtttgttgagatgggtggtcgaaacctg
cttattactaaccctcgcgatattcctggtttcatcaaagagctacaaaaggtcccattt
actgcgattacaggcgtaaacacgctgttcaatgcactagtaaacaacgaagatttccac
gagctagatttcagtaacttacgcttgtctgttggtggcggtatggcggttcaacgtgct
gttgctgaacaatggaagaaagtgacaggtattcacttgctggaaggttatggtttaacc
gagtgtgctcctttggttacgggtaatccttatgacttgaaagactacacgggtgcaatc
ggcttgcctgtaccatcgacggaagttcgtatcattgatgatgaaggtaaagtaattgcc
aatgatcaagtgggtgaattgcaagttcgtggtcctcaagtgatgcaaggttactggcaa
cgcccagaagcgaccaaagaggtgatcgatcaagacggttggttatcgacaggtgacatc
gttaagtttgacgaagaaggcttgctatacatcgttgaccgtaagaaagacatgattctt
gtgtctggatttaacgtctacccgaacgagattgaagacgtagtggctctgcatggtaaa
gtgttagaagtagcggctatcggccaacctcatgaggtgtctggtgagctggttaagatt
tacgtggtaaaacgtgatcctagcctaaccaaagaagacattatcgcgcactgtcgtgaa
cacctaactggctacaagatccctaaattgattgagttccgtgaagagttaccgaaaacc
aatgtcggtaagattttgcgccgtgtattacgtgaagagaatgatgctgagcttgctaaa
cgcgcaagcgagtaa
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