Vibrio cyclitrophicus: FAZ90_06105
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Entry
FAZ90_06105 CDS
T06393
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
vcc
Vibrio cyclitrophicus
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vcc01002
]
FAZ90_06105
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcc01011
]
FAZ90_06105
Peptidases and inhibitors [BR:
vcc01002
]
Cysteine peptidases
Family C82
FAZ90_06105
Peptidoglycan biosynthesis and degradation proteins [BR:
vcc01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FAZ90_06105
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Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Scaffold
Motif
Other DBs
NCBI-ProteinID:
QCI70663
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Position
1:1292030..1293568
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AA seq
512 aa
AA seq
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MLAKYFFGLLVLVSVHAWSYTSSDESGFIPADSELSFMLIYPELTQSIYQDSSLPILWDS
PELVKAFEFQLSLLEQAQMAPLFERQLKQIRQYQAQRQWKELDILLTDTFIYYLSYVENA
PLVGKEWYFSGKLHSKLPAPSPHILMRLKSSVANDYLLEMVLSYAPPVGNFDQFKATYSV
LETASELNIERYRQEGLKRLGDDLSDKVALVERIALVGVDTSMVAVDLPVFDRDLQKAIK
SFQHMHGLTADGIIGPDTIKWINMSFDDRLNSLALNAERVRLWPRDRDSLIVVNVPSFDM
KYWEDGEEVFESKVVVGRKSRKTPLLEINLDSVILNPTWNVPWKIMVKDILPKVKADESY
LETHNFQVIDGWRSMETVDTTEIDWQTINFNSFPYRMRQQAGSRNALGLYKFNTPNKRAI
YLHDTPSKGLFNDDFRAYSSGCIRVEHAEQLAELLFATKVRKVPNQGGDLAPNTKVRLKK
RIPVHIIYQTVLFEEEGIQYRGDIYQYDKAGG
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgttagcgaagtacttctttggattattggtgttagtctctgtgcatgcgtggagctat
acgagttctgacgagagcggatttattccggctgattcagaactctctttcatgctcatt
tatccagagctaacccagagtatttatcaagactcttctcttcctattctttgggactct
cctgaacttgttaaagcatttgagttccaattgtcgcttctagaacaagcccaaatggca
ccgctctttgagcgtcaactcaagcaaattcgtcaataccaagcccaacgccaatggaaa
gagttggacatattattgaccgatacctttatttattacttgagttacgtagaaaatgcg
ccactggtcggtaaagagtggtacttctcaggcaagctacactccaaattacctgcacct
tctcctcatattttgatgagattaaagagcagcgtcgccaatgattatttattggagatg
gtgctgtcttacgcgccgcctgttgggaattttgatcaattcaaggcgacctattcagtg
ttagaaactgcatccgagcttaatatcgagcgatatagacaggaaggtttgaaacgttta
ggtgacgatctttcagataaagtagcgcttgtagaacgtatcgctctggtgggtgtagac
acatcaatggtggctgttgatcttccagtgttcgatcgagatttgcaaaaagcgattaag
tcctttcaacacatgcatggcctgacagctgatgggattatagggcctgacacgatcaaa
tggatcaacatgagttttgatgatcgattgaattcattagcgttgaatgcagagcgcgtt
cgtttgtggccaagagatagagattctctcatcgtcgtcaatgtacctagttttgatatg
aagtactgggaagatggtgaagaggtatttgagtccaaagtcgtcgtgggcagaaagtcg
cgaaaaacaccgcttttagagataaatctagattcggtgatcttaaacccaacttggaat
gtgccatggaaaataatggtgaaagacatcttgcctaaggtgaaagccgatgaaagctac
cttgaaacccataacttccaagtgattgatggttggcgttctatggaaactgtcgatacc
accgagattgattggcaaaccattaatttcaactcgttcccatatcgcatgcgtcaacag
gcgggctctcgaaatgcattgggtttgtataaattcaacacccccaataaacgtgcgata
tatctacatgatacgccaagtaaaggcctgtttaatgatgactttcgtgcttatagctca
ggttgtataagagtcgaacatgccgaacaattggctgaattgctatttgcgactaaggtt
agaaaggttcctaatcaaggcggtgacttagcacctaataccaaggttcgactcaagaag
agaattccagtgcatattatctatcaaactgtattgtttgaagaagagggcattcagtac
cgtggtgatatttaccagtacgataaagcgggtggttaa
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