Vibrio cyclitrophicus: FAZ90_08005
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Entry
FAZ90_08005 CDS
T06393
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
vcc
Vibrio cyclitrophicus
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcc03009
]
FAZ90_08005
Enzymes [BR:
vcc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
FAZ90_08005
Ribosome biogenesis [BR:
vcc03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
FAZ90_08005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QCI71022
LinkDB
All DBs
Position
1:complement(1763850..1764548)
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AA seq
232 aa
AA seq
DB search
MRLDKYLCKSTDLTKSEAIERIRNSEVNVNSETVTDESTQVHESNTILLNSMPLHLREFR
YLLMHKPAGTICSNIDEVYPSLFNYIEIGKVSELHIAGRLDADTTGLVLITDDGRWSFNI
TLPTKSCKKVYRVTLSRDIKDDVADKFKAGIQLQGEQKPTRPAELEVITSKEVLLTITEG
KFHQVKRMFAAVGNRVVGLHREQIGDVRLDVEVGQWRYLTKAEVDSFQQGSE
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttgataaatacctatgtaaaagcactgacctaaccaagtctgaagcgattgaa
cgcatccgtaatagcgaggtgaatgtaaacagtgagactgtcaccgacgaatcgactcag
gttcacgaaagcaacaccatcttgttaaacagcatgccgcttcatttacgtgaatttcgt
tacctcttaatgcacaagcctgcgggtactatttgctccaatatcgacgaagtctatccc
tcgctgttcaactacatcgagataggcaaagtatcagaattgcacatagcagggcgctta
gatgctgacaccacaggcttagttttgattaccgatgatgggcgatggtcattcaatatt
acgctgccaaccaagtcatgtaagaaggtataccgcgtgacattgtcacgagatatcaaa
gatgatgtcgctgataagttcaaagcgggcattcaattgcaaggcgaacaaaaaccgacg
cgtccggcagagcttgaagtgattaccagtaaagaagtgctgttgactattacagaaggt
aagtttcatcaagtaaaacgaatgtttgctgcggtagggaatcgagttgttggtcttcac
cgtgaacagattggtgatgttcgtttagatgttgaagtaggtcagtggcgttatctaacc
aaagccgaagtcgactcatttcagcagggctcggaataa
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