Vibrio cyclitrophicus: FAZ90_08570
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Entry
FAZ90_08570 CDS
T06393
Name
(GenBank) hybrid sensor histidine kinase/response regulator
KO
K10916
two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:
2.7.13.3
3.1.3.-]
Organism
vcc
Vibrio cyclitrophicus
Pathway
vcc02020
Two-component system
vcc02024
Quorum sensing
vcc05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FAZ90_08570
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FAZ90_08570
05111 Biofilm formation - Vibrio cholerae
FAZ90_08570
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vcc01001
]
FAZ90_08570
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vcc02022
]
FAZ90_08570
Enzymes [BR:
vcc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
FAZ90_08570
Protein kinases [BR:
vcc01001
]
Histidine kinases
Lux family [OT]
FAZ90_08570
Two-component system [BR:
vcc02022
]
Lux family
LuxQN/CqsS-LuxU-LuxO (quorum sensing)
FAZ90_08570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
HATPase_c_3
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
QCI71126
LinkDB
All DBs
Position
1:complement(1895469..1897517)
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AA seq
682 aa
AA seq
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MNAIRKVYQYAEPNLTLVGWMGLIGFPAYYVVWEFLFPQPYENLTVRLLCSVLFFGIIYR
NRVPFEWRKYLPAYYQVAITLCLPCFFFFMLLMNNWSNVWVMSFMSAIFLHILLVHVTKV
MFAQTFAGIAIATLGAWVAQGFYLELSMDWTHVPIFLFIYLFGNLFYFRNQVEHEAKVSL
AKSFGAGIAHEMRNPLSGLLTSIDVMQSILPNPKAGHHKGQYELSDQEVRQLREVGDEAM
EIIHSGNETIDLLLTSIDENRVSRSTFKKHSAKTVVEDAIESFNYKRALDRQAISLDVKG
EFSFLGSDTLLKYVMYNLFKNAFHHRSPEDFHIHVTMQSDEMVNQIVVTDNGSGIPSDEI
RRIFQDFYTTGKSGNYGLGLPFCQKVMSSFGGEIKCQSEVDEWTQFTMIFPALTSNTVKD
IKSELAKLKNVLFVSEQNILVTKAKELAGTMGFELTILDIASTLNKKEYQFEFDLIFVDM
ESLDLRASCLDKIESLLSFTESRIVYLFENHPIKRVRNVSFEPVWVETQVWLLNTQPTMD
RLLFDSNYVIPAASAAPLDTANKRTIMVVDDNESLRRFTAMLLEKQGFDVIQKEDGQQAL
DALDTDDIDLILMDIEMPIMDGVEASRRIRNANKAYSSVPIIAHTGDSSPVTLEKMDSSG
MSDFIVKPADKNRLFDKIALWI
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgattcgtaaagtttaccagtacgcagaaccaaacctcaccttggtgggttgg
atgggccttatcggctttccggcttattatgttgtttgggagtttttgttccctcagcca
tatgaaaacctgaccgtacgtttgttatgctcggtactgttctttgggatcatttatcgt
aatcgagtcccgtttgaatggcgaaaatatcttccggcttattatcaagttgccattaca
ctctgtttgccgtgtttctttttcttcatgttgttaatgaacaattggtccaatgtttgg
gtaatgtcgttcatgtctgccatcttcctgcatatcttgctggttcatgtaacaaaagtg
atgttcgcacagacttttgctggaatagccatcgccacattgggcgcatgggtcgctcaa
ggtttctatctcgaactctcaatggattggacgcatgtgcctatctttttgttcatctat
ttgttcggtaacttattctacttccgaaaccaggtagagcacgaagccaaggtgtcgttg
gcgaagtcttttggtgcgggtattgcgcatgaaatgcgaaaccctttaagtggtttattg
acgtctatagatgtaatgcaatcgatattaccgaatccaaaagctggtcatcacaaagga
caatatgagctgagcgatcaagaagtaaggcagcttcgcgaggtgggtgacgaggcaatg
gagatcattcattctggcaacgaaaccattgatctgttactgacttccatcgatgaaaac
cgtgtctctcgttctaccttcaagaagcattcagctaaaacggtcgtcgaggatgcgata
gagagtttcaactacaagcgtgcattagacagacaagcaatatctttggatgtgaagggt
gagtttagtttcttaggcagcgacacgttactgaagtatgtgatgtataacttgttcaag
aacgcgttccatcatcgtagtcctgaagattttcatattcatgtcactatgcaaagcgat
gagatggtcaaccaaatcgtggtgacagataacggttcaggtattccaagtgatgagatt
cgccgtatctttcaagatttttatacaacgggtaaatcgggtaactatggattgggctta
cccttctgccaaaaggtaatgagctcgtttggtggcgaaattaagtgtcagtctgaagtc
gatgaatggacccagtttacgatgattttcccggcgttgacttcaaatacagtgaaagat
attaagagtgaactggctaagttaaaaaatgtgttgtttgtgagtgagcaaaatatattg
gtcacgaaagctaaggaattagctggcacgatggggtttgagctgacgattctagacata
gcatcaacgctcaataaaaaagagtatcaatttgagttcgatttgatttttgtcgatatg
gagagtttagatttaagagccagttgtcttgataaaattgagtcgttgctttcattcaca
gagtctcgaatcgtctacttgtttgagaatcacccaattaaacgggttcgtaatgtctct
tttgaacctgtatgggttgaaacgcaagtttggcttttgaatacgcagccgacaatggac
cgcttgttgtttgattcgaactatgtgataccagctgcgtctgcggcgccgttagatacc
gcgaacaaacgcaccattatggtggtcgatgacaatgaatctttacgccgctttactgcg
atgcttttggaaaaacagggctttgatgtgatccagaaagaggatggccagcaggcacta
gatgcgttggataccgacgatatcgatttgatcctgatggatattgaaatgccaattatg
gatggtgttgaagcttctcgccgtattagaaatgctaacaaagcgtactcatcggtgcct
attattgcacatactggagacagttctcccgtcaccttagagaagatggattcttccggt
atgtctgatttcattgttaagccagcagacaagaaccgattgtttgacaaaatcgcgctg
tggatttag
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