Vibrio cyclitrophicus: FAZ90_08965
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Entry
FAZ90_08965 CDS
T06393
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
vcc
Vibrio cyclitrophicus
Pathway
vcc02020
Two-component system
vcc02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FAZ90_08965
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
FAZ90_08965
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vcc02035
]
FAZ90_08965
Bacterial motility proteins [BR:
vcc02035
]
Flagellar system
Chemotaxis proteins
MCPs
FAZ90_08965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
Laminin_II
ERM_helical
DUF3754
FBF1
CCDC39
DUF948
COG6_N
Motif
Other DBs
NCBI-ProteinID:
QCI71198
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Position
1:1986042..1987676
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AA seq
544 aa
AA seq
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MRSTITFKILVALAVVFTFLLAISTYFQYSQQKELVNSVLSEQLHDKASNYFDSLNMMML
TGTMAQKETLRQKALAQDGIENVRVLRADAVSKLYGPGNDNQTPVDDIDKRALAGETVIE
PFSADWGKGLVIALPMKSSENYRGTNCVACHMAPEGEVLGAIRLEYNLSHVNSLINTQTM
TAIGIMAVISFAGFVLTMGLIRKIIVRPLQQTSRFMTQVSSDKNLSTRLPEQSKDEIGTL
ANSINSFMGTVSDSLEKVQNTSHKLNASANQLTSVAHITEQAASDQQNETAEVQNNVEGI
QAQQINVEQATLTASELINHTADVACKSANQAHDASGEIKNLVTSIEEVKHKILTLNEQT
GEVSSILSVIRGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTAEATGSIE
SIIHQFQQGSEESLTSADRVCEQAHQSSTDIDALSHEMNSVVEEMKQVLAHAQNIQQQTQ
STTLATKDVQQKVETITSHADNTSQSAGETRGISNDLEELSDHLESLINQFTLSSANARD
KKRS
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcaacaatcactttcaaaatcctggtggctttggccgtcgtgtttaccttcctg
cttgccatatcgacgtattttcaatattcgcaacaaaaagagttggttaactcggtactc
agtgaacaactacacgacaaagcgagtaactatttcgatagcctcaatatgatgatgctc
actggtaccatggcgcaaaaagagacactccgtcaaaaagcgctagctcaagacggtatt
gaaaatgttcgagtcttgcgtgcagacgcagtgagtaagttatacgggcctggtaatgac
aaccaaacacctgtggatgatattgataaacgagcgctagcgggtgaaaccgttatcgaa
cccttttctgccgattggggaaaaggcttggttattgctctgccaatgaagtcgagtgag
aactatcgcggcaccaattgtgtggcatgtcatatggcaccggagggggaagttttaggg
gcaattcgacttgaatataaccttagccatgtcaactcgctgatcaatactcaaacgatg
accgcgatcggtattatggcggtgatctcttttgctggtttcgtgttaaccatggggctg
attcgtaaaatcatcgttcgccctcttcaacagacatctcgctttatgacccaagtcagc
agcgataaaaacctatccactcggctgcccgaacaaagtaaagatgagattggaacactg
gctaactctattaactcgttcatgggcaccgtttccgacagtttggaaaaggtacaaaac
acctcacataagttgaatgcgtctgccaatcaactgaccagcgttgcgcacattaccgaa
caagcagccagtgatcagcagaatgaaacggctgaagtacaaaacaatgttgaagggata
caagctcagcagatcaacgtagaacaagcgacgttaacggcctccgaactcatcaaccac
acagctgatgtagcgtgcaaaagtgccaaccaggcacatgacgcaagtggtgaaataaag
aacctagtcaccagcattgaagaggtgaaacacaaaatactgacactcaatgagcaaact
ggagaggtttcttcaatattgagtgttattcgaggcattgccgatcaaactaaccttctt
gccttgaatgcagcaattgaagccgctcgcgcaggtgaacaaggtcgtggctttgcggta
gttgctgatgaggttcgtaatcttgcctcacgaacggctgaagcgacaggcagtattgaa
tcgattatccatcagttccaacaaggtagcgaagaatctttaacttcggccgaccgagtt
tgcgagcaagcacatcaaagctcaacagatatcgatgcactatcgcatgaaatgaacagt
gtcgtggaagaaatgaaacaagtgctggcccatgcacaaaatatccagcagcaaacgcaa
tccaccacactggcgaccaaagacgttcagcagaaggtcgagaccatcacttcacatgcc
gataatacgtcacaatctgctggtgaaacccgcgggatcagtaatgaccttgaagagctg
tctgaccaccttgaatcactgataaatcaattcactttgtcgagcgcaaacgccagagat
aagaaaaggtcataa
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