Vibrio cyclitrophicus: FAZ90_09840
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Entry
FAZ90_09840 CDS
T06393
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
vcc
Vibrio cyclitrophicus
Pathway
vcc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FAZ90_09840 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcc02000
]
FAZ90_09840 (msbA)
Enzymes [BR:
vcc01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
FAZ90_09840 (msbA)
Transporters [BR:
vcc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
FAZ90_09840 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
RsgA_GTPase
EMC3_TMCO1
AAA_24
APS_kinase
AAA_29
Zeta_toxin
nSTAND3
DEAD
AAA_25
MMR_HSR1
G-alpha
ABC_ATPase
SLFN-g3_helicase
TniB
ATPase
Glyco_hydro_3_C
ABC_membrane_2
AAA_15
MBG_3
Motif
Other DBs
NCBI-ProteinID:
QCI71362
LinkDB
All DBs
Position
1:complement(2175673..2177421)
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AA seq
582 aa
AA seq
DB search
MSTQTDETTWVTFKRLWTYIRLYKAGLGVAVIALIINAVSDTYMISLLKPLLDEGFGNAE
SDFLRTLPIIIFVMMFVRGVSGFVSTYCLSWVSGNVVMEIRRKIFSHFMHMPVSFFDKEQ
TGALLSRITYDSEQVSAATSKALVSIVREGASIIGLLTLMFWNSWQLSLVLFAVAPLVAW
AISIVSKRFRKISKNMQTSMGHVASSAEQMLKGHKVVLTYGGQDLEKHRFDKVSNQMRQQ
SMKLITAQAAANPIIQMIASVAIVVVLFLASVDSIKAELTPGTFTVVFSAMFGLLRPLKA
LTNVTSEFQRGMAASTTLFGLMDLDTEQNKGTLKPETVTGEVAVKDVTFTYDGAEKPALD
KVSFKIPKGKTVALVGRSGSGKSTIANLFTRFYDVDSGSIELDGHDIRDYELRNLREHFA
LVSQNVHLFNDSVANNIAYAAEEKYSREQIEHAAKLAHASEFIEGMENGIDTVVGENGAS
LSGGQRQRIAIARALLRDAPVLILDEATSALDTESERAIQSALEELQKDKTVLVIAHRLS
TIEQADEILVVDDGHIVERGAHAELIAHDGAYAQLHRIQFSG
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacacaaacagatgaaactacctgggtcacatttaaaagactttggacttatatt
cgactatataaggcaggcctaggtgttgcggttattgcgcttattataaatgccgtctct
gatacctatatgatttccttactaaagccgttacttgatgaaggctttggtaatgctgaa
tctgactttttacgcacgcttccaattatcatctttgtcatgatgttcgttcgtggcgtc
agtggttttgtgtcaacctattgcttgagctgggtctctggcaatgtggtgatggaaatt
cgtcgaaaaatctttagccatttcatgcatatgccggtttctttctttgataaagaacag
acaggcgcattgttatctcgaattacgtacgattcagaacaagtgtctgctgccaccagt
aaagcgttagtcagtattgttcgtgaaggtgcaagtattattggcttactgacgctgatg
ttctggaatagttggcagttgtctttggtgttattcgctgtagcgcctcttgtcgcgtgg
gcgatcagtatcgtatcgaagcgattcagaaagatctccaagaatatgcaaaccagtatg
ggtcatgttgcttcttcagctgaacaaatgctgaaagggcataaagtggttctaacttac
ggtggtcaagacctagaaaaacatcgctttgataaagttagtaatcaaatgcgccaacaa
agcatgaaactaatcactgctcaagcggctgctaacccaatcattcagatgatcgcgtca
gtggcgattgttgttgttctattccttgctagtgttgactctattaaagctgagcttacc
cctggtacgtttaccgttgtcttctctgcaatgtttggtttactacgtccgctaaaagca
ttaaccaacgtaacgtctgaattccaacgtggtatggcagcaagtaccactctatttggt
ttgatggatctagatacagagcaaaataaaggtacgttgaagcctgaaacggtaacgggt
gaagttgcggttaaagatgtgacttttacctatgacggagcagagaaaccagcactcgac
aaggtgagtttcaaaattcccaaaggtaaaacggttgcacttgttgggcgatcaggttcg
ggcaagagtaccattgccaacctgtttactcgtttttatgacgtagattcaggctctatc
gaacttgatggacatgatattcgtgattacgaattgaggaatctacgtgagcactttgcc
cttgtttctcagaatgtgcacttgtttaacgactcggtagcgaacaacatcgcgtatgca
gctgaagaaaaatattctcgcgaacagattgaacacgcggctaaacttgctcatgcgagt
gagtttattgagggcatggaaaatggcattgatacggttgtaggtgagaatggtgcgagt
ctttctggtggacaaagacagcggattgcgattgcacgagctttattgagagatgcccct
gtgttgattcttgatgaagcaacgtctgcactggatacagaatcagaaagagccattcaa
tctgccctagaagagctacaaaaagacaaaacagtactggtgatcgctcaccgactatcg
accatcgagcaagctgatgagattttagtggttgatgacggtcacattgtcgaaagaggt
gcacacgctgagctaattgcacatgatggcgcttatgctcaactgcaccgaattcagttt
agcggataa
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