KEGG   Vibrio cyclitrophicus: FAZ90_10565
Entry
FAZ90_10565       CDS       T06393                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
vcc  Vibrio cyclitrophicus
Pathway
vcc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:vcc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FAZ90_10565
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:vcc02022]
    FAZ90_10565
Two-component system [BR:vcc02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   FAZ90_10565
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_8 AAA AAA_2 AAA_7 AAA_22 HTH_30 AAA_16 AAA_3 IstB_IS21
Other DBs
NCBI-ProteinID: QCI71494
LinkDB
Position
1:2326093..2327442
AA seq 449 aa
MCHVYFIDDESDLRMAIEQSFELAEIDAEFFPDAESALIAIQKNGLPHVIITDICLPGIS
GHDLLSTVMHKDKEIPVIMITGHGDISMAVQAIHNGAYDFIEKPFANERLIETTKRAIEK
RQLTLENQELKRSLKASKALGPRIIGDTQSMTELRSIITHVADTNADILLFGETGTGKEL
VARSLHEQSSRREQNFVAVNCGAVPENLIESELYGHEKGAFTGAENKRVGKFEFAQGGTL
FLDEIESMPMQAQIRLLRVLQERVIERVGSNGLVPLDIRVIAATKVDLKKASEEGSFRQD
LYYRLNVVTLDLPPLRSRQEDIPALFHHFLLVAAARYGKTAPALPQTELHALLAHDWPGN
VRELRNTAERFVLLGKLSHLSDNTVESNQHLSLAELVSDFEKSTLKQALIECNGSIKETM
ERLQLPRKTLYDKMQKHQLAKESYRQSEN
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgtgtcacgtctatttcattgatgatgaatccgatctaagaatggccattgagcaaagc
tttgaacttgccgagattgacgccgaattctttcccgatgcagaatctgcgctgatcgcc
atccagaaaaatggtcttccccacgtgatcattaccgatatctgtttgccgggtatttct
gggcatgacctactcagcacggtcatgcataaagacaaagaaatcccggtcatcatgatc
actggtcatggtgatatctcaatggccgttcaagctatccataacggtgcctatgatttc
attgaaaagccctttgcgaatgaacgcttaattgagacgaccaaacgcgccatcgaaaaa
cgccagttaactctcgaaaaccaagaactgaagcgctcgttgaaggcgagtaaggcacta
ggaccgagaatcattggtgacacacaatctatgacagagctacgttctatcatcactcat
gttgccgataccaacgccgatattttattgtttggcgaaacggggacgggcaaagagcta
gttgctcgttctctgcatgaacaaagcagtcgccgagagcaaaactttgttgcggtcaac
tgtggcgccgttcctgaaaacctgattgaaagtgagctctatggtcatgaaaaaggtgct
tttacgggagccgaaaacaaacgtgtaggtaagttcgagttcgcgcaaggcggcacccta
ttcttagatgaaatagaatccatgccaatgcaggcgcaaatacgactattgcgcgtatta
caagagcgagtcattgaaagagtcggctcgaacggattagtaccgctcgatattcgcgtg
attgccgcaactaaagtcgacctaaaaaaagcttctgaggaaggatctttccgacaagat
ctctattatcggctcaatgtagttactttagacttgccgccattgagaagtcgccaagaa
gatatacctgcactctttcaccatttcttgctcgtcgcggcggctcgttatggcaaaaca
gcccctgcacttccacaaacagaactgcacgcacttttagctcatgattggcccggaaat
gtacgagaattacgtaatactgccgagcgttttgtacttttaggcaagctttctcattta
tcagacaacaccgttgaatcaaaccagcatttatcgctagctgagttggtctctgacttt
gagaaaagcactctaaagcaagcacttattgagtgtaacggcagtataaaagagaccatg
gaaaggctgcaacttccgcgcaaaaccctctatgacaagatgcaaaaacatcaacttgcg
aaagagtcataccgacagagcgaaaactaa

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