Vibrio cyclitrophicus: FAZ90_11940
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Entry
FAZ90_11940 CDS
T06393
Symbol
bamB
Name
(GenBank) outer membrane protein assembly factor BamB
KO
K17713
outer membrane protein assembly factor BamB
Organism
vcc
Vibrio cyclitrophicus
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcc02000
]
FAZ90_11940 (bamB)
Transporters [BR:
vcc02000
]
Other transporters
Pores ion channels [TC:
1
]
FAZ90_11940 (bamB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PQQ_2
Beta-prop_ACSF4
PQQ
Beta-prop_EMC1_N
Beta-prop_FAM234A_B
Motif
Other DBs
NCBI-ProteinID:
QCI71738
LinkDB
All DBs
Position
1:complement(2627666..2628826)
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AA seq
386 aa
AA seq
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MKKMFPKAALCAIALGLLVGCAGEEDTVIMAPVPTVNSEFTPKQEWSTSVGDGVGHYFSK
LSPELAYDKVFVASREGLVKALDPETGKELWKVDLEKDVLARLSGGLTAAYGKVFVGSEN
GEMIALDESTGEELWRVSVNGEVLASPATENNMVLVHTSRGMMIALDQETGEQKWTISTE
VPSLTLRGDSTPVAVSGGVFWGTANGRLAAAIVDRGQLIWQQPVGTPKGATEIDRLVDVD
ASPVVLGGTLYTVGINGQLIAIDLRAGKPIWKRNYSSAIDLASDGSRLFVVTDKDHVVAV
DARSGTELWSTPLLENRLLTAPAIINGYVVVGDTEGYLHWLDRSSGEFVAQQLVDDSGFA
VAPIELPEGYLVTTRNGDVKKLTISQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagatgtttcccaaagcggcgttgtgtgcgattgctcttggcctgttagtaggc
tgtgcgggtgaagaagacacagtcattatggctccagtaccaacagtaaatagcgagttc
actcctaaacaggaatggtctacgtcagttggtgatggtgttggtcactacttttcaaaa
ctatcgccagaactggcgtacgacaaagtatttgttgcaagccgcgaaggtttggttaaa
gcgcttgatcctgaaacgggtaaagagctctggaaagtcgatctagagaaagacgtactg
gctcgtttatcgggtggcttaacggcggcttacggcaaagtatttgttggttctgagaat
ggcgaaatgatcgcgttggacgaatcgacgggtgaagagctatggcgtgtttcagtgaat
ggcgaggtgcttgcatccccagcgactgaaaacaatatggtactggttcatactagtcgc
ggcatgatgattgctctagaccaagagaccggtgagcaaaagtggacaatcagcactgaa
gttccaagcctaacactccgtggtgacagtacgcctgttgctgtttctggtggtgttttc
tggggtacggcaaatggtcgtctagctgccgctattgttgaccgtggccagcttatttgg
caacagccagtaggtacgccaaaaggcgcaacggaaattgatcgcttagtggatgttgat
gcatctccagttgttcttggtggtactttgtataccgttggtatcaatggtcaattgatt
gctatcgatcttcgagctggcaagccaatttggaaacgtaactattcgtcagcgattgat
ctcgcgagtgatggcagtcgtttgtttgtggttaccgataaagaccatgtggttgcagtt
gatgctcgtagtggtactgaactttggagcactccattgttagaaaaccgcttactgaca
gcacctgctattattaatggttatgttgtcgtgggtgacaccgaaggttatctgcactgg
ttagatcgttcatctggtgagtttgttgctcaacagttagtcgatgatagcggctttgcg
gttgcaccaattgaattgcctgaaggctacttagtgacgactcgcaatggcgatgtaaag
aaactaacgattagccaataa
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