Vibrio cyclitrophicus: FAZ90_12485
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Entry
FAZ90_12485 CDS
T06393
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vcc
Vibrio cyclitrophicus
Pathway
vcc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FAZ90_12485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcc03400
]
FAZ90_12485
Enzymes [BR:
vcc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FAZ90_12485
DNA repair and recombination proteins [BR:
vcc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FAZ90_12485
Prokaryotic type
FAZ90_12485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QCI71836
LinkDB
All DBs
Position
1:complement(2748783..2749463)
Genome browser
AA seq
226 aa
AA seq
DB search
MSAPKTWESIINDEREKEYFQNVLTFVEQQRNSGKTVYPPQDQVFSAFDMTPFESVRVVI
LGQDPYHGANQAHGLAFSVLPGVKIPPSLRNMYKELAQDIKGFEAPSHGFLESWASQGVL
MLNTVLTVEEAKAHSHAKCGWESFTDAIIAELNQRSEPIIFLLWGAHAQKKGQVIDAKKH
HVLVAPHPSPLSARRGFFGCQHFSTTNKLLSSIDQQPIDWRLPTEL
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaccaaagacatgggaatccatcattaatgatgaacgtgagaaagagtatttc
caaaatgttctcacttttgtcgaacagcaacgtaatagtgggaaaactgtctaccctcca
caagatcaggtgttcagtgcctttgatatgacaccttttgagtcggtgcgagtggttatc
ttaggtcaagacccttatcacggtgccaatcaagcgcatggcttagctttttctgtactg
ccaggtgtaaaaattccaccttcgctacgtaatatgtacaaagagcttgcacaagatata
aagggttttgaggctcctagtcatggttttcttgaatcttgggcatcgcaaggggtgtta
atgttgaatacagtcctaacggtagaagaggcgaaagcacactcacatgcaaagtgtggt
tgggagagctttactgatgcgatcatcgctgagttgaatcagcgttctgaacctatcatc
ttcttgctttggggagcgcatgctcaaaagaaaggccaagtgattgatgccaaaaaacat
catgtgttggttgcacctcacccatcgccattatccgcacgtcgtggtttcttcggttgt
cagcatttctcaacaactaataagctgctttcttctattgatcaacaacctatcgattgg
cggctaccaacagaattatag
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