Vibrio cyclitrophicus: FAZ90_14210
Help
Entry
FAZ90_14210 CDS
T06393
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
vcc
Vibrio cyclitrophicus
Pathway
vcc00541
Biosynthesis of various nucleotide sugars
vcc01100
Metabolic pathways
vcc01250
Biosynthesis of nucleotide sugars
Module
vcc_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FAZ90_14210 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vcc01005
]
FAZ90_14210 (rfaD)
Enzymes [BR:
vcc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
FAZ90_14210 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
vcc01005
]
Core region
FAZ90_14210 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
ThiF
Polysacc_synt_2
NAD_binding_10
adh_short
KR
Phage_T7_Capsid
TrkA_N
NmrA
Motif
Other DBs
NCBI-ProteinID:
QCI72133
LinkDB
All DBs
Position
1:3142508..3143449
Genome browser
AA seq
313 aa
AA seq
DB search
MIIVTGGAGMIGSNIVKALNEAGHNDILVVDNLKDGKKFKNLVDLDITDYMDRDDFLTQV
MAGDDFGHIEAVFHEGACSATTEWDGKYMMLNNYEYSKELLHYCVEREIPFLYASSAATY
GETDTFIEEREYEGALNVYGYSKQQFDNYVRRLTADAAAHNETLSQIVGFRYFNVYGPRE
QHKGSMASVAFHLNNQMNAGENPKLFAGSETFKRDFVYVGDVAAVNLWFLENGVSGLFNL
GTGNAESFEEVAKAVIKHHGKGEIETIPFPEHLKGAYQEFTQADLTKLRGTGCDIEFKAV
ADGVAEYMKIVNA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtaactggtggtgctggcatgattggcagcaatattgttaaggcgcttaat
gaagcgggccacaacgatattctagtcgtcgacaacttaaaagatggtaagaaatttaag
aaccttgtagacctagacatcacggattacatggatcgtgatgacttcctaactcaagtc
atggccggtgatgattttggtcatattgaagctgttttccatgaaggagcatgctctgct
accactgagtgggatggcaaatacatgatgctcaacaactatgaatactcaaaagagcta
cttcattactgtgttgagcgtgaaattcctttcttgtatgcctcttcagctgcaacttac
ggtgagaccgacactttcatcgaagagcgagagtacgaaggtgcattgaatgtctacggc
tattcaaaacaacaatttgataactacgttcgtcgcttaaccgcggatgcagcagcacac
aacgaaacgctttcgcaaatcgtagggtttcgttacttcaatgtttatggtccacgcgag
caacacaaaggcagcatggcctctgtcgctttccacctaaacaaccaaatgaatgccggt
gaaaacccgaaattgttcgcaggtagcgaaacctttaagcgtgattttgtgtatgtgggt
gatgtcgcggctgtaaacttgtggttcttagagaatggggtatcaggcctctttaatcta
ggtactggcaatgctgagtcgtttgaagaagtcgccaaggcagttatcaagcaccatggt
aaaggcgaaatcgaaacgattcctttccctgagcatttaaaaggtgcttaccaagaattc
actcaagcagacctaacgaagcttcgcggtacaggttgcgatatcgagtttaaagcagta
gccgatggcgttgctgagtacatgaagatcgtaaacgcttaa
DBGET
integrated database retrieval system
