KEGG   Vibrio cyclitrophicus: FAZ90_14490
Entry
FAZ90_14490       CDS       T06393                                 
Symbol
gspD
Name
(GenBank) type II secretion system protein GspD
  KO
K02453  general secretion pathway protein D
Organism
vcc  Vibrio cyclitrophicus
Pathway
vcc03070  Bacterial secretion system
vcc05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vcc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FAZ90_14490 (gspD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    FAZ90_14490 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vcc02044]
    FAZ90_14490 (gspD)
Secretion system [BR:vcc02044]
 Type II secretion system
  General secretion pathway protein
   FAZ90_14490 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 CarboxypepD_reg
Other DBs
NCBI-ProteinID: QCI72187
LinkDB
Position
1:complement(3197971..3199995)
AA seq 674 aa
MKHWFKKSAWLLAGSLICTPAAIASDFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGK
IDVRSYDVLNEEQYYSFFLNVLEVYGYAVVEMDSGVLKIIKAKDSKTSAIPVVGDRDSIT
GDSVVTRVVTVRNVSVRELSPLLRQLNDNAGAGNVVHYDPANIILITGRAAVVNRLAEII
KRVDQAGDKEIEVVELKNASAAEMVRIVDALSKTTDAKNTPAFLQPKLVADERTNAILIS
GDPKVRSRLRKLIEQLDVEMATKGNNQVIYLKYAKAEDLVDVLKGVSDNLQSEKQSSTKG
SSSQRNQVMISAHSDTNSLVITAQPDIMNALQDVIAQLDIRRAQVLIEALIVEMAEGDGI
NLGVQWGNLDTGAVIQYGNTGASIGGVMVGLEEAKDTETTTAVYDDNGDFVRNETTTESG
DYSTLASALSGVNGAAMSVVMGDWTALISAVATDSNSNILSSPSITVMDNGEASFIVGEE
VPVLTGSTAGSSNDNPFQTVERKEVGIKLKVVPQINEGDSVQLQIEQEVSNVLGANGAVD
VRFAKRQLNTSVIVQDGQMLVLGGLIDERALESESKVPFLGDIPVLGHLFKSTSTQVEKK
NLMVFIKPTIIRDGMTADGITQRKYNFIRAEQLYKSEQGLKLLDDDNIPVLPKFGSDMNH
PAEIQAFIDQMETE
NT seq 2025 nt   +upstreamnt  +downstreamnt
gtgaagcattggtttaagaaaagtgcatggttactggcaggaagcttaatctgcacaccc
gcagccatcgctagtgattttagtgccagctttaagggcactgacattcaagagtttatt
aatattgttggccgcaacctagagaagacgatcatcgttgacccatcggtgcgcggtaaa
attgatgtacgtagctatgacgtactcaatgaagagcaatattacagcttcttcctaaac
gtattagaagtgtatggctacgcggtcgttgaaatggactcaggcgttcttaagatcatc
aaagccaaagattctaaaacctcagcaattcccgttgttggtgatcgtgattcgatcaca
ggcgacagtgtagtcacgcgtgttgtgacggttcgtaatgtctcggttcgtgaactttct
cctttgcttcgtcaattgaacgataatgccggtgcgggtaacgttgtgcactacgatcct
gccaatatcatcttgattaccggtcgtgcggcggtagtgaaccgtttagcagaaatcatc
aagcgtgttgaccaagcgggtgataaagagattgaagtcgttgagctaaagaatgcatcg
gcggcagaaatggttcgtattgttgatgctctgagtaaaaccaccgatgctaaaaacaca
cctgcattcctacagcctaaattggttgccgatgagcgtactaatgcaattcttatttcc
ggtgacccaaaggtacgtagccgtttaagaaagctgattgaacagcttgatgtagagatg
gcgaccaaaggtaacaaccaagttatctaccttaaatacgcaaaagcggaagatcttgtc
gatgtgttgaaaggcgtatcggacaacttgcagtcagagaaacaatcttcaactaaaggc
agttcatcgcaacgtaatcaagtcatgatctcagcccacagtgataccaactcgttggtc
attaccgcacaaccagacatcatgaacgcgctgcaagacgttatcgcgcagttggatatt
cgtcgtgcccaagtgttgatcgaagccttaattgtcgagatggctgaaggtgacggcatt
aaccttggcgtgcagtggggtaacctagatactggtgccgtgattcagtatggtaacacc
ggtgcatcgattggtggcgtgatggttggtttggaagaagccaaagacactgaaacgacc
actgccgtttatgatgacaatggtgactttgttcgtaatgaaaccaccactgaatcgggt
gactattctaccttggcatctgctctttctggcgttaatggcgccgcaatgagtgttgtt
atgggtgattggacagcgttgatcagcgcggttgcgaccgactcaaactcaaacatccta
tcttctccaagtatcacggttatggacaatggcgaggcttcattcattgtgggtgaggaa
gtgcctgttctaaccggttctaccgcaggttcaagcaacgacaacccattccaaacggtt
gaacgtaaagaagtgggtatcaagcttaaagtggtgccacaaatcaacgaaggtgactcg
gttcagctgcaaatagaacaagaagtctctaacgtattgggcgccaatggtgcagttgat
gttcgttttgctaagcgtcaactgaacacgtctgtgattgttcaagacggtcaaatgttg
gtgctgggtggcttgattgatgagcgtgcactggaaagtgagtctaaggtgccgttcttg
ggtgacatcccagtacttggacacctgtttaaatcaaccagtactcaggttgagaaaaag
aacctaatggttttcatcaagccaaccatcatccgtgatggcatgacagccgacggtatc
actcagcgtaagtacaacttcattcgtgctgagcagttatacaagtctgaacaaggtttg
aagctgctggatgacgataatatcccggtactgcctaaatttggttccgatatgaatcac
ccggctgaaatccaagccttcatcgatcaaatggaaacagaataa

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