Vibrio cyclitrophicus: FAZ90_16040
Help
Entry
FAZ90_16040 CDS
T06393
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
vcc
Vibrio cyclitrophicus
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcc02000
]
FAZ90_16040
Transporters [BR:
vcc02000
]
Other transporters
Pores ion channels [TC:
1
]
FAZ90_16040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
DUF5777
Pico_P1A
Phage_OMP
Motif
Other DBs
NCBI-ProteinID:
QCI72568
LinkDB
All DBs
Position
2:192381..193451
Genome browser
AA seq
356 aa
AA seq
DB search
MKRLSKIMCAVVAASGLAAAPSIAATTYVGAKVGLGWLDSACVSGTKCDDDAIGAGIYSG
YNFTERLGIELSSDFLGDYKTSFSKNGTTSSFSDPLIAISLTPMYRLPVQQEFDVFFKAG
PAYISHGGEDDVVFAAGIGLEKQLSSNWAVRAEYQYFDDFDDNYVQDLNSNLLSVGVSYN
FGTGNTTASAAAAAASAVAVTQAPSEPITEPAVVVEEKTTVVVTKAQTESFSQGMFETNS
TELSTDGKIALMPIVEVLKAHPQSSVDVVGHTDSTGSAEYNMMISKKRAAAVAAYIEEQG
IESDRISASGQGEDNPIASNDTAEGRAQNRRVDATIPAFEYQQEVQVEEVIVEAAE
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagactgtcaaaaatcatgtgtgctgttgttgccgcttcaggcttagctgctgct
ccttcaattgctgcaaccacttatgttggtgcaaaagtcggcctaggctggttagacagc
gcgtgtgtaagcggtactaaatgtgatgatgatgcaattggtgctggtatctactctggt
tataatttcacagaaagacttggcattgagttgagttctgatttcttaggtgattacaaa
actagcttttcgaagaatggcactacatcatcgtttagcgatcctttgatcgcaatttcc
ttaactccaatgtaccgcctaccggtacagcaagagtttgacgtattcttcaaagcgggg
cctgcttacatttctcacggtggtgaagatgatgttgttttcgctgctggtatcggccta
gagaagcagctgtcttctaattgggcggtgcgtgctgaataccaatacttcgatgatttc
gacgacaactatgttcaagatctgaactcaaacctactgtctgttggtgttagctacaat
ttcggtacaggcaacacaacggcatcagcggctgcagcagcagcttctgccgttgctgta
acacaagcaccatctgagccaatcacagagcctgcagttgttgtggaagagaaaacaacg
gtagttgttactaaagcgcaaactgaaagcttctctcaaggtatgtttgaaacaaacagc
actgaactgtctaccgacggaaaaattgctctaatgccaatcgttgaagtacttaaagct
cacccacaatcatcagttgatgttgttggtcacaccgattcaacaggttcagcagaatac
aacatgatgatctctaagaaacgtgctgctgctgtagctgcatacatcgaagagcaaggc
attgaatcagaccgcatttcagcgtctggccaaggtgaagataatcctattgcatcaaac
gatactgcagaaggccgcgctcaaaaccgccgtgttgacgcaactatccctgcttttgaa
taccagcaagaagtacaagtagaagaagttatcgtagaagctgctgagtaa
DBGET
integrated database retrieval system
