Vibrio cyclitrophicus: FAZ90_17735
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Entry
FAZ90_17735 CDS
T06393
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
vcc
Vibrio cyclitrophicus
Pathway
vcc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FAZ90_17735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcc03000
]
FAZ90_17735
03400 DNA repair and recombination proteins [BR:
vcc03400
]
FAZ90_17735
Enzymes [BR:
vcc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
FAZ90_17735
Transcription factors [BR:
vcc03000
]
Prokaryotic type
Helix-turn-helix
AraC family
FAZ90_17735
DNA repair and recombination proteins [BR:
vcc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FAZ90_17735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QCI72879
LinkDB
All DBs
Position
2:complement(576017..577465)
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AA seq
482 aa
AA seq
DB search
MLKNINNNSVLTTEQCSLARYSRDARFDGMFFTAVKTTGIFCRPICPASPPKEENVEYFS
HQAQALKAGYRPCLRCRPDSAPFSPAWKGVETTFLRALQLIDNGALNSGSIVELAARLGI
SDRYLRTLFDNYIGVSPKQYSLYSQLMFAKQLLHTSSMSITDVGFASGFNSTRRFNDAFL
KELKLSPSQIRRSKPSNYLSNHIQLSFHGPLDWEHLLGFYRRRMIEGLEGIGENYYQRTV
NVNGSKGWFKATLVKENRLDIEFELDDISQLRSLIANIRRMFDLDVDIAKVEAFFMTIDP
NLVAKSGIRIPGVWSAWEAGVRAILGQQVSVTAAIGQLNLLVREISGTHQASVLQELANS
QECSELQQIAYASEKAYFPTPKQIADADVSFLRMPGSRKETLKRFAEYMVDNEAEHPSKW
IDLKGIGPWTIQYALLRGLSEPNHLLISDLVVKKFIEHRSTINTESVSPWGSYATFHCWN
QS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaaatatcaataacaacagtgtcttaactactgagcagtgtagtttggctcgc
tactctcgagatgctcggtttgacggcatgttttttaccgcagtgaaaacgacaggtatc
ttttgtcgacctatttgcccggcaagcccgcccaaagaagaaaatgtcgaatacttttct
catcaagctcaggctttgaaagcgggttatcgtccttgtttacgatgtcgccctgatagc
gcaccattctcacccgcgtggaaaggcgtcgaaacaacgtttttgcgtgctttacaattg
atcgataacggtgctttgaattcaggctcaatcgtagaacttgcggctcgtttgggtatc
tcagaccgctatttacgaaccttattcgacaattacatcggtgtgtcaccaaagcaatac
agcctatatagccagttaatgtttgcgaagcagttactgcacaccagtagcatgagcatt
actgatgtcggttttgcgagcggctttaacagtacacgccgtttcaatgatgccttttta
aaagagctgaagctctcaccaagccaaatccgacgctctaaacccagtaactacctgagt
aaccatatccaactttcttttcatggccctttagattgggagcacctgttgggtttttat
cgacgaagaatgattgaaggtctggagggcatcggtgaaaactattatcaacgcacggtg
aatgtgaatggttctaaaggctggttcaaggccaccttagtaaaagaaaaccgcttagat
attgaatttgagttggacgatataagccaattaagaagtttgattgctaacattcgacgt
atgttcgaccttgatgtcgatattgccaaggttgaggctttttttatgaccattgatcct
aacttggttgccaagagtggtatccgtattcctggcgtttggagtgcttgggaggctggt
gtaagagcgattctagggcagcaagtctcagtaacagcagcgatcggccaactcaactta
ctggtgcgagagatttctggtacgcatcaagcttctgttttacaagagttggctaattcc
caagagtgctctgaattacaacaaattgcttatgcatctgagaaagcgtatttcccaaca
cctaaacaaatagctgatgctgatgtgagctttttaagaatgccgggaagtcgtaaggaa
actttaaagcgttttgccgaatacatggtcgacaacgaagccgaacacccttctaagtgg
attgacctaaagggcattgggccttggacgattcagtacgcgctgctcagagggttaagt
gagcctaaccacctgttgattagcgatttggtggtgaagaagttcattgagcatcgctct
acgattaatacagagagtgtttcgccttggggaagctacgccacgttccactgctggaat
cagtcttaa
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