Vibrio cyclitrophicus: FAZ90_18290
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Entry
FAZ90_18290 CDS
T06393
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
vcc
Vibrio cyclitrophicus
Pathway
vcc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FAZ90_18290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcc02000
]
FAZ90_18290
02044 Secretion system [BR:
vcc02044
]
FAZ90_18290
Transporters [BR:
vcc02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
FAZ90_18290
Secretion system [BR:
vcc02044
]
Type I secretion system
Adhesin protein transporter
FAZ90_18290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
Zeta_toxin
Peptidase_C39
AAA_21
AAA_29
AAA_23
CSTF_C
Motif
Other DBs
NCBI-ProteinID:
QCI72985
LinkDB
All DBs
Position
2:complement(695049..697163)
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AA seq
704 aa
AA seq
DB search
MQDPLLNSLIYVSRYYGLANSPEALINGLPLSDGKLTPFLFPRSAERAGLVAKENRCDLE
SIPHLILPAILLLKQGEACVLNSIDSEKQEAEIITAESGMVPIIIPLDELKEQFIGRYFL
VKKQFRYDERSPEVLKTRKGHWFWSTIWESKNIYRDVLIASILINIFAIAAPMFTRLVYD
KVVPNLAFETLWVLASGIFVVFLFDLLLKLMRSYFIDVAGKKSDILISSKLFSKVLGIRM
EAKPASVGAFAKNLQEFESIREFFTSATIGSLIDLPFALMFLALIWLMAGNLVFVPVAGV
VVLIIYALLIQGPLRRTIEEGSRLASQKYANLIESLAGLETVKLFSAQSQFQFRWEEAVA
HMANWNIKSRRITDSIQNTAGFVQQSTNVGMIIFGVYLIAEGELTMGGLIAATMLSGRAI
GPLVQLSLLSTRYNQAKSSMTLIEQVMSMPDEQEEGKRYIHRPIIQGHIALDKVTFHYPD
SPVASIRDLTLNISPGEKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDMEQLHHV
DVRRNIGCVPQDSNLFYGSVRDNITLGRPLVDDRDVMDAANRAGVTAFTQQDPAGLERQV
GEGGALLSGGQRQSIAIARAFLGRPPVLLLDEPTSAMDNRSEMHIKHQLSQLQPSETLIL
ITHKTSMLDIVDRVIVMEKGSIIADGPKAQVLSDLKQGKVRAAS
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatccactattgaactcattgatctacgttagccggtattacgggttagctaac
tcgcccgaagcgttgatcaatgggctaccactatctgatgggaagctaacccctttccta
ttccctcgttcagctgaacgagcagggttagtggcgaaagaaaatcgttgcgacttagaa
agtattcctcaccttattctacctgctattttacttctcaagcagggcgaggcatgcgtt
ctgaatagtattgattcagaaaaacaagaagcagagatcatcacagcagagagtggaatg
gtgccgatcatcattccactagacgagctgaaagagcaattcatcggtcgttacttccta
gtaaaaaaacagttccgttatgatgagcgctcaccagaagtcctaaaaacacgtaagggt
cactggttttggagtacgatctgggaatctaaaaacatctatcgagatgtgttgattgcc
tctattctgatcaatatattcgcgattgctgcgccaatgtttactcgtttggtatacgac
aaagtagtacctaacctcgcatttgaaaccctatgggtattggcgagtggtatttttgtc
gtcttccttttcgacctgcttttaaaattaatgcgaagttactttattgatgtcgcgggt
aagaaatccgatatccttatttcctctaagcttttcagcaaagtgttagggattcgcatg
gaagccaagcccgcttcagttggcgctttcgcaaaaaacctgcaagagttcgagtctatt
cgtgagttctttacctctgcaactattggttcattaatcgatttaccattcgcgttgatg
ttccttgctttaatttggttaatggcagggaacctcgtgtttgttcctgttgctggtgta
gtagtcctgattatctacgcactgttaatccaaggaccactgcgtcgtacgattgaagaa
gggtcacgtcttgcttctcaaaaatacgcgaacttaattgaaagtttggctgggttagag
acggttaaactgttcagcgcgcaaagccaatttcagttccgctgggaagaagccgttgct
catatggcaaactggaacattaaaagtcgacgtatcaccgacagcatccaaaacactgct
ggcttcgttcaacaaagtaccaacgttgggatgatcattttcggggtgtatctcattgcg
gaaggtgaactcactatgggtggtttaattgccgcaaccatgttgagcggccgtgccatt
ggccctcttgttcagttgtcgctgctttcgacccgctataaccaagcgaaatcatcaatg
actttgattgaacaagtgatgtcgatgccagacgagcaagaagaaggtaaacgctacatc
caccgtcctattatccaaggccatattgcgctagataaagtaacgtttcattatcctgat
tctccagttgcttctatcagagatctcaccctaaacatttctccgggtgagaaagttgcc
attattggtcgtattggctcgggtaagacaacgctggaacgcctgattatgggcctgtat
aagcccacagaaggccatgtacgcattgatgacaccgatatggaacaactgcaccatgtc
gacgtacgacgcaacataggctgtgttcctcaagacagtaacctattctatggttcagtg
agagacaacattacattaggccgccctctagtcgacgatcgtgatgtgatggatgcagcc
aaccgtgccggtgttaccgcctttactcagcaagatcctgcaggtttagaacgtcaagtc
ggtgaaggcggtgctttgctctctggtggccagcgtcaatcgatcgccattgccagagca
ttcctaggtcgcccgccagtacttttattagatgagccaaccagcgccatggataatcgc
tcagagatgcacatcaagcatcagctgagtcaattgcaaccaagtgagaccctaatcctt
attacgcacaagacttcgatgttggatattgtagacagagtaattgtgatggaaaaaggc
agcattatcgccgacggtccaaaagcacaagttctatcagacctcaagcaaggcaaagta
agggctgctagctaa
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